RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 MRPS7Q9Y2R9 242 aaKnown RBP11.34□□□□□ -0.59
TRAPPC3-203ENST00000373163 PRELID3BQ9Y3B1 194 aa11.34□□□□□ -0.59
TRAPPC3-203ENST00000373163 IGKV3-7A0A075B6H7 116 aa11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 ELOA3CA0A087WX78 387 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 LOC100130705A0A1B0GUX0 176 aa11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 K7EMT4 169 aa11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 NDUFA4O00483 81 aa11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 WBP4O75554 376 aaKnown RBP11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 CRHBPP24387 322 aa11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 MRPS15P82914 257 aaKnown RBP11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 UBE2DNLQ8IWF7 75 aa11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 PUSL1Q8N0Z8 303 aaKnown RBP11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 THYN1Q9P016 225 aa11.33□□□□□ -0.6
TRAPPC3-203ENST00000373163 RAB27BO00194 218 aa11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 IFNA21P01568 189 aa11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 IFNA17P01571 189 aa11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 FCGR3AP08637 254 aa11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 INSL4Q14641 139 aa11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 PLAC9Q5JTB6 97 aa11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 RBM48Q5RL73 367 aaKnown RBP11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 ZNF767PQ75MW2 155 aa11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 BSCL2Q96G97 398 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 SCRT1Q9BWW7 348 aa11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 SMPXQ9UHP9 88 aa11.32□□□□□ -0.6
TRAPPC3-203ENST00000373163 CGB1A6NKQ9 187 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 C15orf62A8K5M9 175 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 CD74P04233 296 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 CD1AP06126 327 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 CDK1P06493 297 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 RPL30P62888 115 aaKnown RBP11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 RPL8P62917 257 aaKnown RBP11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 P2RY14Q15391 338 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 C12orf74Q32Q52 190 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 SPSB3Q6PJ21 355 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 H1FOOQ8IZA3 346 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 GBGT1Q8N5D6 347 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 OR4S2Q8NH73 311 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 VN1R17PQ8TDU5 208 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 MAFIPQ8WZ33 124 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 PHYHIPQ92561 330 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 TMEM80Q96HE8 168 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 RHPN1-AS1Q9BWJ2 59 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 CELA1Q9UNI1 258 aa11.31□□□□□ -0.6
TRAPPC3-203ENST00000373163 ZNF705EA8MWA4 302 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC3-203ENST00000373163 CHEK1O14757 476 aa11.3□□□□□ -0.6
TRAPPC3-203ENST00000373163 HLA-GP17693 338 aa11.3□□□□□ -0.6
TRAPPC3-203ENST00000373163 ACSM3Q53FZ2 586 aa11.3□□□□□ -0.6
TRAPPC3-203ENST00000373163 LIPKQ5VXJ0 399 aa11.3□□□□□ -0.6
TRAPPC3-203ENST00000373163 LEMD1Q68G75 181 aa11.3□□□□□ -0.6
TRAPPC3-203ENST00000373163 PYDC1Q8WXC3 89 aa11.3□□□□□ -0.6
TRAPPC3-203ENST00000373163 CMTM3Q96MX0 182 aa11.3□□□□□ -0.6
TRAPPC3-203ENST00000373163 X6R8D5 127 aa11.3□□□□□ -0.6
TRAPPC3-203ENST00000373163 IGHV7-4-1A0A0J9YVY3 117 aa11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 ERICH4A6NGS2 130 aa11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 J3QRK9 145 aa11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 GIG44P09565 113 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 CD36P16671 472 aa11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 TNP2Q05952 138 aa11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 TMEM116Q8NCL8 245 aa11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 OR56B1Q8NGI3 324 aa11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 KCNK7Q9Y2U2 307 aa11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 RBMX2Q9Y388 322 aaKnown RBP11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 LRP1BQ9NZR2 4599 aa11.29□□□□□ -0.6
TRAPPC3-203ENST00000373163 IGHV3-49A0A0A0MS15 119 aa11.28□□□□□ -0.6
TRAPPC3-203ENST00000373163 IGLC7A0M8Q6 106 aa11.28□□□□□ -0.6
TRAPPC3-203ENST00000373163 CD37P11049 281 aa11.28□□□□□ -0.6
TRAPPC3-203ENST00000373163 DEFB131AP59861 70 aa11.28□□□□□ -0.6
TRAPPC3-203ENST00000373163 OR2B8PP59922 312 aa11.28□□□□□ -0.6
TRAPPC3-203ENST00000373163 PAFAH1B2P68402 229 aa11.28□□□□□ -0.6
TRAPPC3-203ENST00000373163 SSX1Q16384 188 aa11.28□□□□□ -0.6
TRAPPC3-203ENST00000373163 TMEM41BQ5BJD5 291 aa11.28□□□□□ -0.6
TRAPPC3-203ENST00000373163 STHQ8IWL8 128 aa11.28□□□□□ -0.6
TRAPPC3-203ENST00000373163 CYB5BO43169 146 aa11.27□□□□□ -0.61
TRAPPC3-203ENST00000373163 FAM90A2PQ658T7 463 aa11.27□□□□□ -0.61
TRAPPC3-203ENST00000373163 UBAC2Q8NBM4 344 aa11.27□□□□□ -0.61
TRAPPC3-203ENST00000373163 TCTEX1D2Q8WW35 142 aa11.27□□□□□ -0.61
TRAPPC3-203ENST00000373163 PLGRKTQ9HBL7 147 aa11.27□□□□□ -0.61
TRAPPC3-203ENST00000373163 SMPD3Q9NY59 655 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC3-203ENST00000373163 EFCAB10A6NFE3 127 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 DFFBO76075 338 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 HRASP01112 189 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 IGLV2-14P01704 120 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 BRWD1-AS2P59051 145 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 PLA2G7Q13093 441 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 HSD17B12Q53GQ0 312 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 ATP6V0BQ99437 205 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 HSD17B10Q99714 261 aaKnown RBP11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 SRSF8Q9BRL6 282 aaKnown RBP11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 CENPOQ9BU64 300 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 HRASLSQ9HDD0 168 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 TBC1D24Q9ULP9 559 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 SPATA2Q9UM82 520 aa11.26□□□□□ -0.61
TRAPPC3-203ENST00000373163 IGHV3-21A0A0B4J1V1 117 aa11.25□□□□□ -0.61
TRAPPC3-203ENST00000373163 F8W735 103 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC3-203ENST00000373163 SLC17A2O00624 439 aa11.25□□□□□ -0.61
TRAPPC3-203ENST00000373163 SPP1P10451 314 aa11.25□□□□□ -0.61
TRAPPC3-203ENST00000373163 C4BPBP20851 252 aa11.25□□□□□ -0.61
TRAPPC3-203ENST00000373163 NPY1RP25929 384 aa11.25□□□□□ -0.61
TRAPPC3-203ENST00000373163 WNT4P56705 351 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms