RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SRSF4Q08170 494 aaKnown RBP13.48□□□□□ -0.25
COL17A1-202ENST00000369733 PYY3Q5JQD4 70 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 SLX1AQ9BQ83 275 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 C1QTNF5Q9BXJ0 243 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 HES7Q9BYE0 225 aa13.48□□□□□ -0.25
COL17A1-202ENST00000369733 WNT9BO14905 357 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 SLC25A17O43808 307 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 C1RLQ9NZP8 487 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 A1L4Q6 167 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 GPX4P36969 197 aaPredicted RBP13.47□□□□□ -0.25
COL17A1-202ENST00000369733 TBR1Q16650 682 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 VSIRQ9H7M9 311 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 TNS1Q9HBL0 1735 aaKnown RBP13.47□□□□□ -0.25
COL17A1-202ENST00000369733 IGHV3-48P01763 117 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 REG1AP05451 166 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 DEFB124Q8NES8 71 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 OR1N2Q8NGR9 330 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 LINC00470Q9BZP3 86 aa13.47□□□□□ -0.25
COL17A1-202ENST00000369733 TRIP6Q15654 476 aaKnown RBP13.46□□□□□ -0.25
COL17A1-202ENST00000369733 PRDM13Q9H4Q3 707 aa13.46□□□□□ -0.25
COL17A1-202ENST00000369733 SPEM2Q0P670 501 aa13.46□□□□□ -0.25
COL17A1-202ENST00000369733 SLC25A53Q5H9E4 307 aa13.46□□□□□ -0.25
COL17A1-202ENST00000369733 FAM166AQ6J272 317 aa13.46□□□□□ -0.25
COL17A1-202ENST00000369733 MBD3L1Q8WWY6 194 aa13.46□□□□□ -0.25
COL17A1-202ENST00000369733 CLDN16Q9Y5I7 305 aa13.46□□□□□ -0.25
COL17A1-202ENST00000369733 ATXN7O15265 892 aaPredicted RBP13.46□□□□□ -0.25
COL17A1-202ENST00000369733 LINC00305Q7Z4B0 112 aa13.46□□□□□ -0.26
COL17A1-202ENST00000369733 A0A1W2PQM1 296 aa13.46□□□□□ -0.26
COL17A1-202ENST00000369733 C7orf71A4D174 169 aa13.46□□□□□ -0.26
COL17A1-202ENST00000369733 GPR6P46095 362 aaPredicted RBP13.46□□□□□ -0.26
COL17A1-202ENST00000369733 GOLT1AQ6ZVE7 132 aa13.46□□□□□ -0.26
COL17A1-202ENST00000369733 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 RBFOX2O43251 390 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL17A1-202ENST00000369733 SNAI2O43623 268 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 SMIM13P0DJ93 91 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 ATP5IP56385 69 aaPredicted RBP13.45□□□□□ -0.26
COL17A1-202ENST00000369733 MIR17HGQ75NE6 70 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 OR4A5Q8NH83 315 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 REPIN1Q9BWE0 567 aaKnown RBP13.45□□□□□ -0.26
COL17A1-202ENST00000369733 A0A1W2PR77 199 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 A6NNC1 897 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 GDF9O60383 454 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 CD55P08174 381 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 FCGR2BP31994 310 aaPredicted RBP13.45□□□□□ -0.26
COL17A1-202ENST00000369733 XIRP1Q702N8 1843 aaKnown RBP13.45□□□□□ -0.26
COL17A1-202ENST00000369733 RFPL3SP0C7P2 107 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 C2orf83Q53S99 150 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 DGAT2L7PQ6IED9 249 aa13.45□□□□□ -0.26
COL17A1-202ENST00000369733 RBPMS2Q6ZRY4 209 aaKnown RBP13.45□□□□□ -0.26
COL17A1-202ENST00000369733 IGKV3-7A0A075B6H7 116 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 NDUFA2O43678 99 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 ECSCRQ19T08 205 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 CDCP2Q5VXM1 449 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 FADS6Q8N9I5 356 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 RPS20P60866 119 aaKnown RBP13.44□□□□□ -0.26
COL17A1-202ENST00000369733 NUTF2P61970 127 aaKnown RBP13.44□□□□□ -0.26
COL17A1-202ENST00000369733 PEX7O00628 323 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 NAPSAO96009 420 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 Q5PR19 223 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 ERASQ7Z444 233 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 WDR31Q8NA23 367 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 TDRD6O60522 2096 aaKnown RBP13.44□□□□□ -0.26
COL17A1-202ENST00000369733 MOSP00540 346 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 TMEM78Q5T7P6 136 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 STPG1Q5TH74 334 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 TCF24Q7RTU0 167 aa13.44□□□□□ -0.26
COL17A1-202ENST00000369733 C16orf97H3BN30 126 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 J3QW42 95 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 RNASE7Q9H1E1 156 aaKnown RBP13.43□□□□□ -0.26
COL17A1-202ENST00000369733 LTBP1Q14766 1721 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 PGPEP1LA6NFU8 196 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 F2RL2O00254 374 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 ACP7Q6ZNF0 438 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 LURAP1LQ8IV03 231 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 OR4C13Q8NGP0 309 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 IFI27L2Q9H2X8 130 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 ZNF414Q96IQ9 312 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 RP1L1Q8IWN7 2480 aaPredicted RBP13.43□□□□□ -0.26
COL17A1-202ENST00000369733 PMS2CLQ68D20 193 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 E9PQ18 207 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 PLPPR1Q8TBJ4 325 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 FGF11Q92914 225 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 DIRC2Q96SL1 478 aa13.43□□□□□ -0.26
COL17A1-202ENST00000369733 OR13A1Q8NGR1 328 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 H7C2G1 150 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 APOHP02749 345 aaPredicted RBP13.42□□□□□ -0.26
COL17A1-202ENST00000369733 ANOS1P23352 680 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 TFPI2P48307 235 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 SAP25Q8TEE9 199 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 EAF1Q96JC9 268 aaPredicted RBP13.42□□□□□ -0.26
COL17A1-202ENST00000369733 PRR33A8MZF0 331 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 IFNL4K9M1U5 179 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 CTSSP25774 331 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 PEAR1Q5VY43 1037 aaPredicted RBP13.42□□□□□ -0.26
COL17A1-202ENST00000369733 ZNRF1Q8ND25 227 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 RFNGQ9Y644 331 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 RTN4RL2Q86UN3 420 aa13.42□□□□□ -0.26
COL17A1-202ENST00000369733 PSG9Q00887 426 aa13.41□□□□□ -0.26
COL17A1-202ENST00000369733 MBNL2Q5VZF2 373 aaKnown RBP13.41□□□□□ -0.26
COL17A1-202ENST00000369733 CABIN1Q9Y6J0 2220 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms