RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ZXDCQ2QGD7 858 aaPredicted RBP10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 GFI1BQ5VTD9 330 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 TMEM54Q969K7 222 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 ADAMTSL3P82987 1691 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 GPR6P46095 362 aaPredicted RBP10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 TMEM170BQ5T4T1 132 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 GEMIN7Q9H840 131 aaKnown RBP10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 HIGD1CA8MV81 97 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 LOXL3P58215 753 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 HSD52Q0P140 79 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 C1QL2Q7Z5L3 287 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 GTF3AQ92664 365 aaKnown RBP10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 IGHV5-10-1A0A0J9YXX1 117 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 LOC101059948A0A1B0GTJ6 334 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 WNT9BO14905 357 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 UBE2L6O14933 153 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 C1QTNF9P0C862 333 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 WFDC3Q8IUB2 231 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 CHCHD1Q96BP2 118 aaKnown RBP10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 IFI27L2Q9H2X8 130 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 R4GN57 208 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 NHP2Q9NX24 153 aaKnown RBP10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 ARFGEF1Q9Y6D6 1849 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 J3QW42 95 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 IGLV3-21P80748 117 aaPredicted RBP10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 CKAP5Q14008 2032 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 ZNF826PQ6ZT77 177 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 TTTY12Q9BZ98 90 aa10.8□□□□□ -0.68
SYNCRIP-201ENST00000355238 IL9P15248 144 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 ZNF501Q96CX3 271 aaPredicted RBP10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 CEACAM1P13688 526 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 CIARTQ8N365 385 aaPredicted RBP10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 SCGB3A1Q96QR1 104 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 FAM117AQ9C073 453 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 PTPRFP10586 1907 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 APOMO95445 188 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 VKORC1L1Q8N0U8 176 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 TMEM186Q96B77 213 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 H3BTX0 84 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 IGFBP2P18065 325 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 OR5P3Q8WZ94 311 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 MOB4Q9Y3A3 225 aa10.79□□□□□ -0.68
SYNCRIP-201ENST00000355238 LAMB2P55268 1798 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 TRBV6-7A0A0A0MS04 114 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 EAF1Q96JC9 268 aaPredicted RBP10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 SFTPCP11686 197 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 UBE2V1Q13404 147 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 PLPPR1Q8TBJ4 325 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 CYSLTR1Q9Y271 337 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 SLC25A53Q5H9E4 307 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 WBP1LQ9NX94 342 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 PAPPAQ13219 1627 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 IGHV3-72A0A0B4J1Y9 119 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 ITGBL1O95965 494 aaPredicted RBP10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 FAM90A27PA6NNH2 459 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 J3QRE1 110 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 CYTL1Q9NRR1 136 aa10.78□□□□□ -0.68
SYNCRIP-201ENST00000355238 TRAV1-1A0A0B4J248 108 aa10.77□□□□□ -0.68
SYNCRIP-201ENST00000355238 CGB1A6NKQ9 187 aa10.77□□□□□ -0.68
SYNCRIP-201ENST00000355238 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.68
SYNCRIP-201ENST00000355238 TDHQ8IZJ6 230 aa10.77□□□□□ -0.68
SYNCRIP-201ENST00000355238 CACNG8Q8WXS5 425 aa10.77□□□□□ -0.68
SYNCRIP-201ENST00000355238 IFNL4K9M1U5 179 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 CCL4P13236 92 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 FOXL1Q12952 345 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 OR9G4Q8NGQ1 327 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 ITLN1Q8WWA0 313 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 SLC25A2Q9BXI2 301 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 LINC00114Q6XXX2 140 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 HBDP02042 147 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 TSPOP30536 169 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 TEX38Q6PEX7 206 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 FAM214BQ7L5A3 538 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 MRAP2Q96G30 205 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 RNASE7Q9H1E1 156 aaKnown RBP10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 WFDC1Q9HC57 220 aa10.77□□□□□ -0.69
SYNCRIP-201ENST00000355238 F5P12259 2224 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 NDUFA2O43678 99 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 GPX1P07203 203 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 RNASE1P07998 156 aaKnown RBP10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 ADRA2AP08913 450 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 DNM1P46Q6ZS02 220 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 MIR17HGQ75NE6 70 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 C16orf97H3BN30 126 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 FAM106CPP0CH98 169 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 GAGE13Q4V321 117 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 WDR82Q6UXN9 313 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 GDF15Q99988 308 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 KIAA1217Q5T5P2 1943 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 hCG_38984A0A1B0GV85 526 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 ID3Q02535 119 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 DCAF10Q5QP82 559 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 OR52E5Q8NH55 327 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 ZNF479Q96JC4 524 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 IGHV1-45A0A0A0MS14 117 aa10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 HOXA3O43365 443 aaPredicted RBP10.76□□□□□ -0.69
SYNCRIP-201ENST00000355238 MOSP00540 346 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms