RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 JTBO76095 146 aa13.08□□□□□ -0.32
EXOSC4-201ENST00000316052 REG1AP05451 166 aa13.08□□□□□ -0.32
EXOSC4-201ENST00000316052 RPL8P62917 257 aaKnown RBP13.08□□□□□ -0.32
EXOSC4-201ENST00000316052 UBE2UQ5VVX9 321 aa13.08□□□□□ -0.32
EXOSC4-201ENST00000316052 ZNF66Q6ZN08 573 aa13.08□□□□□ -0.32
EXOSC4-201ENST00000316052 UXS1Q8NBZ7 420 aa13.08□□□□□ -0.32
EXOSC4-201ENST00000316052 LGALS14Q8TCE9 139 aa13.08□□□□□ -0.32
EXOSC4-201ENST00000316052 CCL28Q9NRJ3 127 aa13.08□□□□□ -0.32
EXOSC4-201ENST00000316052 IGLV11-55A0A075B6I3 123 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 TNFSF12O43508 249 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 HRASP01112 189 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 CLEC3BP05452 202 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 HLA-GP17693 338 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 FAM106AQ4KMX7 169 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 TM4SF20Q53R12 229 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 ZNF57Q68EA5 555 aaPredicted RBP13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 TPRA1Q86W33 373 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 GVQW1Q8N7I0 195 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 EEF1AKMT3Q96AZ1 226 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 BCL7BQ9BQE9 202 aa13.07□□□□□ -0.32
EXOSC4-201ENST00000316052 TRAV3A0A0B4J244 114 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 MFSD2BA6NFX1 497 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 A8MWP6 167 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 SCAF4O95104 1147 aaKnown RBP13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 PSMB9P28065 219 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 FCGR2CP31995 323 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 OR2B8PP59922 312 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 NEDD8Q15843 81 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 OR4A47Q6IF82 309 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 SFXN4Q6P4A7 337 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 UNQ9165/PRO28630Q6UXU0 137 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 SLC16A13Q7RTY0 426 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 OR5H6Q8NGV6 325 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 SECTM1Q8WVN6 248 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 RHBDL2Q9NX52 303 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 BET1LQ9NYM9 111 aa13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 RSL24D1Q9UHA3 163 aaKnown RBP13.06□□□□□ -0.32
EXOSC4-201ENST00000316052 FRAS1Q86XX4 4008 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 SCGNO76038 276 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 DHFRP00374 187 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 CLEC2LP0C7M8 214 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 DEFA4P12838 97 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 HIST1H1BP16401 226 aaKnown RBP13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 SDC2P34741 201 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 TMBIM6P55061 237 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 TIMM50Q3ZCQ8 353 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 SPAG16Q8N0X2 631 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 BEST4Q8NFU0 473 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 OR52B4Q8NGK2 314 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 OVOL2Q9BRP0 275 aa13.05□□□□□ -0.32
EXOSC4-201ENST00000316052 TRAV18A0A075B6X5 111 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 IGLC7A0M8Q6 106 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 SULT1C2O00338 296 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 FCER2P06734 321 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 C8orf88P0DMB2 117 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 CNPY1Q3B7I2 92 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 BTNL8Q6UX41 500 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 HOGA1Q86XE5 327 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 OR4A5Q8NH83 315 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 SLC25A38Q96DW6 304 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 HRASLSQ9HDD0 168 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 KMT2AQ03164 3969 aa13.04□□□□□ -0.32
EXOSC4-201ENST00000316052 TRBV7-1A0A0A6YYK4 115 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 IGHV3-35A0A0C4DH35 117 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 PPYP01298 95 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 ARPC4P59998 168 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 MXD1Q05195 221 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 MSMO1Q15800 293 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 ZNF502Q8TBZ5 544 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 RAB2BQ8WUD1 216 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 GGTLC1Q9BX51 225 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 SLC5A7Q9GZV3 580 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 PTTG2Q9NZH5 202 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 SSR3Q9UNL2 185 aa13.03□□□□□ -0.32
EXOSC4-201ENST00000316052 UPK2O00526 184 aa13.02□□□□□ -0.33
EXOSC4-201ENST00000316052 RBFOX2O43251 390 aaKnown RBP eCLIP13.02□□□□□ -0.33
EXOSC4-201ENST00000316052 GPR183P32249 361 aa13.02□□□□□ -0.33
EXOSC4-201ENST00000316052 POU2AF1Q16633 256 aa13.02□□□□□ -0.33
EXOSC4-201ENST00000316052 ZNF585BQ52M93 769 aa13.02□□□□□ -0.33
EXOSC4-201ENST00000316052 CLVS1Q8IUQ0 354 aaPredicted RBP13.02□□□□□ -0.33
EXOSC4-201ENST00000316052 ZBTB34Q8NCN2 500 aa13.02□□□□□ -0.33
EXOSC4-201ENST00000316052 OR10W1Q8NGF6 305 aa13.02□□□□□ -0.33
EXOSC4-201ENST00000316052 CXorf58Q96LI9 332 aa13.02□□□□□ -0.33
EXOSC4-201ENST00000316052 LOC102724200A0A096LPH7 203 aaPredicted RBP13.01□□□□□ -0.33
EXOSC4-201ENST00000316052 CCDC160A6NGH7 325 aa13.01□□□□□ -0.33
EXOSC4-201ENST00000316052 NOL3O60936 208 aaKnown RBP13.01□□□□□ -0.33
EXOSC4-201ENST00000316052 TAS2R31P59538 309 aa13.01□□□□□ -0.33
EXOSC4-201ENST00000316052 FXYD4P59646 89 aa13.01□□□□□ -0.33
EXOSC4-201ENST00000316052 ANKRD55Q3KP44 614 aa13.01□□□□□ -0.33
EXOSC4-201ENST00000316052 ZNF818PQ6ZRF7 136 aa13.01□□□□□ -0.33
EXOSC4-201ENST00000316052 YIPF6Q96EC8 236 aa13.01□□□□□ -0.33
EXOSC4-201ENST00000316052 AIFM2Q9BRQ8 373 aa13.01□□□□□ -0.33
EXOSC4-201ENST00000316052 TRAV25A0A0B4J276 109 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 HPRT1P00492 218 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 RPA2P15927 270 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 NQO2P16083 231 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 PTBP1P26599 531 aaKnown RBP eCLIP13□□□□□ -0.33
EXOSC4-201ENST00000316052 IDNKQ5T6J7 187 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 PLET1Q6UQ28 207 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms