RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 STAG3L2P0CL84 134 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 STAG3L3P0CL85 134 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 IGLC2P0DOY2 106 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 IGLC3P0DOY3 106 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 SRFP11831 508 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 ARR3P36575 388 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 Q0VFX4 171 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 RNASEKQ6P5S7 137 aaKnown RBP12.2□□□□□ -0.46
COL6A2-201ENST00000300527 LEAP2Q969E1 77 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 MYOD1P15172 320 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 TIGITQ495A1 244 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 HSBP1O75506 76 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 GPR6P46095 362 aaPredicted RBP12.19□□□□□ -0.46
COL6A2-201ENST00000300527 ERVK-16P61578 105 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 RPL39P5Q59GN2 51 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 STPG3Q8N7X2 389 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 OR13A1Q8NGR1 328 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 LNP1A1A4G5 178 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 CAMPP49913 170 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 HES3Q5TGS1 186 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 FBXW9Q5XUX1 488 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 STUMQ69YW2 141 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 WDR54Q9H977 334 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 SH2D2AQ9NP31 389 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 GCNT2Q8N0V5 402 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 Q8N7P7 452 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 ZNF439Q8NDP4 499 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 KCNS1Q96KK3 526 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 PKIBQ9C010 78 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 SLC45A2Q9UMX9 530 aa12.19□□□□□ -0.46
COL6A2-201ENST00000300527 NPIPB11E5RHQ5 1161 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 CER1O95813 267 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
COL6A2-201ENST00000300527 EFNB3Q15768 340 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 LYSMD4Q5XG99 296 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 TCTEX1D1Q8N7M0 179 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 SGK494Q96LW2 274 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 VPS25Q9BRG1 176 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 DUSP23Q9BVJ7 150 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 BET1LQ9NYM9 111 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 LOXL2Q9Y4K0 774 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 ZNF324O75467 553 aaPredicted RBP12.18□□□□□ -0.46
COL6A2-201ENST00000300527 MT-CO2P00403 227 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 CRYABP02511 175 aaKnown RBP12.18□□□□□ -0.46
COL6A2-201ENST00000300527 IGFBP2P18065 325 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 RHOBP62745 196 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 RAB30Q15771 203 aa12.18□□□□□ -0.46
COL6A2-201ENST00000300527 ALKBH7Q9BT30 221 aaPredicted RBP12.18□□□□□ -0.46
COL6A2-201ENST00000300527 BOKQ9UMX3 212 aaPredicted RBP12.18□□□□□ -0.46
COL6A2-201ENST00000300527 LY6G6EA0A0G2JKS1 128 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 RPL19P84098 196 aaKnown RBP12.17□□□□□ -0.46
COL6A2-201ENST00000300527 MOB3BQ86TA1 216 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 SLC25A40Q8TBP6 338 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 GMPPAQ96IJ6 420 aaPredicted RBP12.17□□□□□ -0.46
COL6A2-201ENST00000300527 SSBP4Q9BWG4 385 aaPredicted RBP12.17□□□□□ -0.46
COL6A2-201ENST00000300527 ZNF331Q9NQX6 463 aaPredicted RBP12.17□□□□□ -0.46
COL6A2-201ENST00000300527 U3KQA8 63 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 M0QZ24 198 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 FOXF2Q12947 444 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 ZNF738Q8NE65 137 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 ENY2Q9NPA8 101 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 V9GYV3 84 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 NCKAP5O14513 1909 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 CA2P00918 260 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 APCSP02743 223 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 OPRK1P41145 380 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 PMCHL1Q16048 86 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 Q6ZR03 302 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 KLHDC1Q8N7A1 406 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 Q8N976 141 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 SLC24A4Q8NFF2 622 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 CLEC7AQ9BXN2 247 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 PCED1AQ9H1Q7 454 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 MBNL3Q9NUK0 354 aaKnown RBP12.17□□□□□ -0.46
COL6A2-201ENST00000300527 RPH3ALQ9UNE2 315 aa12.17□□□□□ -0.46
COL6A2-201ENST00000300527 OOEPA6NGQ2 149 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 M0R2Z0 102 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 OR1C1Q15619 314 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 LINC00479Q96M42 142 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 BMPR1BO00238 502 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 TSPOP30536 169 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 FABP6P51161 128 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 ARL2-SNX15V9GYD0 113 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 AHRRA9YTQ3 701 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 LYZL6O75951 148 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 MFAP2P55001 183 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 ARG2P78540 354 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 Q0VG73 95 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 TBC1D28Q2M2D7 210 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 ZNF718Q3SXZ3 478 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 LYG1Q8N1E2 194 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 COQ2Q96H96 371 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 DEFB127Q9H1M4 99 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 CLEC5AQ9NY25 188 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 CDC42EP3Q9UKI2 254 aa12.16□□□□□ -0.46
COL6A2-201ENST00000300527 RAB31Q13636 194 aa12.15□□□□□ -0.46
COL6A2-201ENST00000300527 IBA57Q5T440 356 aaKnown RBP12.15□□□□□ -0.46
COL6A2-201ENST00000300527 TSKUQ8WUA8 353 aa12.15□□□□□ -0.46
COL6A2-201ENST00000300527 PATE3B3GLJ2 98 aa12.15□□□□□ -0.46
COL6A2-201ENST00000300527 P0C879 139 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms