RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PERPQ96FX8 193 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 FNDC4Q9H6D8 234 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 MIOXQ9UGB7 285 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 POMT1Q9Y6A1 747 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 M0R1B8 84 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 AREGP15514 252 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 FABP6P51161 128 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 TMEM65Q6PI78 240 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 ST6GALNAC5Q9BVH7 336 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 SLC25A32Q9H2D1 315 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 VSIRQ9H7M9 311 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 PITPNC1Q9UKF7 332 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 LSM5Q9Y4Y9 91 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 ENSAO43768 121 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 CLN5O75503 358 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 CD80P33681 288 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 ZNF83P51522 516 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 CCL8P80075 99 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 PSMG4Q5JS54 123 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 PRAMEF5Q5TYX0 476 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 GGNBP1Q5YKI7 109 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 ZNF343Q6P1L6 599 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 ZNF525Q8N782 197 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 LRTM2Q8N967 370 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 OR10R2Q8NGX6 335 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 MITD1Q8WV92 249 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 SECTM1Q8WVN6 248 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 RAB40CQ96S21 281 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 HRH4Q9H3N8 390 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 FBLL1A6NHQ2 334 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 RRHO14718 337 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 OR7C1O76099 320 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 GHRHP01286 108 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 AESQ08117 197 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 PRSS8Q16651 343 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 SLC25A26Q70HW3 274 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 OR4F17Q8NGA8 305 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 OR4F5Q8NH21 305 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 ITLN1Q8WWA0 313 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 ABHD14BQ96IU4 210 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 OR4F4Q96R69 305 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 MFFQ9GZY8 342 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 HEYLQ9NQ87 328 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 ZNF355PQ9NSJ1 428 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 OR5H8P0DN80 308 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 FHITP49789 147 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 MEOX2P50222 304 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 SHEQ5VZ18 495 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 BTNL8Q6UX41 500 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 GLDNQ6ZMI3 551 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 OSR2Q8N2R0 312 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 GALNT11Q8NCW6 608 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 WFDC11Q8NEX6 87 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 OR10P1Q8NGE3 313 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 OR2V2Q96R30 315 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 TXNDC17Q9BRA2 123 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 SELENOIQ9C0D9 397 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 KAAG1Q9UBP8 84 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 SLC45A2Q9UMX9 530 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 A0A1W2PS18 150 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 HLA-DMAP28067 261 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 GLRXP35754 106 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 MPV17LQ2QL34 196 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 TMEM185AQ8NFB2 350 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 OR2T6Q8NHC8 308 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 PIMREGQ9BSJ6 248 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 SFXN3Q9BWM7 321 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 LYRM2Q9NU23 88 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 TIMM9Q9Y5J7 89 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 GPR31O00270 319 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 PPIHO43447 177 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 IL5P05113 134 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 PPP1CBP62140 327 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 RPS16P62249 146 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 CCL20P78556 96 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 HES1Q14469 280 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 UQCC3Q6UW78 93 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 TOMM40LQ969M1 308 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 ZNF331Q9NQX6 463 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 TMED3Q9Y3Q3 217 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 J3QR89 54 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 GPR37O15354 613 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 CDS2O95674 445 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 HLA-AP01891 365 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 ARG1P05089 322 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 NDUFB7P17568 137 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 F2RP25116 425 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 CNN1P51911 297 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 FXYD4P59646 89 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 KLRB1Q12918 225 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 SP6Q3SY56 376 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 RNF212Q495C1 297 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 COMMD7Q86VX2 200 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 SLC2A9Q9NRM0 540 aa4.45□□□□□ -1.7
TOPBP1-201ENST00000260810 HERC2O95714 4834 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 MEIKINA0A087WXM9 373 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 RFPL4AA6NLU0 287 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 RFPL4AL1F8VTS6 287 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 HIST1H1BP16401 226 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms