RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PSMG3Q9BT73 122 aaPredicted RBP9.8□□□□□ -0.84
LAMA4-201ENST00000230538 TTC32Q5I0X7 151 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 GATAD1Q8WUU5 269 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 TMEM101Q96IK0 257 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 PSMB11A5LHX3 300 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 PLSCR2Q9NRY7 297 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 CDX1P47902 265 aaPredicted RBP9.8□□□□□ -0.84
LAMA4-201ENST00000230538 PPP1R32Q7Z5V6 425 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 HIST1H2BAQ96A08 127 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 NPCDR1Q9BY65 106 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 TMEM106BQ9NUM4 274 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 NPIPB13A6NJU9 1138 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 NPIPB4C9JG80 1138 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 DNAL4O96015 105 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 CSRP3P50461 194 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 CD69Q07108 199 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 ALKBH7Q9BT30 221 aaPredicted RBP9.8□□□□□ -0.84
LAMA4-201ENST00000230538 ZNF708P17019 499 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 EGR1P18146 543 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 TIMM23BQ5SRD1 257 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 ZNF506Q5JVG8 444 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 SIGLEC12Q96PQ1 595 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 LNP1A1A4G5 178 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 RFPL3SP0C7P2 107 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 ZP1P60852 638 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 S4R3C0 116 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 ANKRD36A6QL64 1941 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 SMIM13P0DJ93 91 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 CA7P43166 264 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 TMEM170BQ5T4T1 132 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 TEX45Q8NA69 505 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 IFI27L2Q9H2X8 130 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 TNFRSF18Q9Y5U5 241 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 IGHV3-49A0A0A0MS15 119 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 CBLN1P23435 193 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 ASIPP42127 132 aa9.79□□□□□ -0.84
LAMA4-201ENST00000230538 ZNF703Q9H7S9 590 aaPredicted RBP9.79□□□□□ -0.84
LAMA4-201ENST00000230538 FOXD3Q9UJU5 478 aaPredicted RBP9.79□□□□□ -0.84
LAMA4-201ENST00000230538 IGKV1D-33P01593 117 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 IGKV1-33P01594 117 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 GLRXP35754 106 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 WDR82Q6UXN9 313 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 SDHCQ99643 169 aaPredicted RBP9.78□□□□□ -0.84
LAMA4-201ENST00000230538 FOXA2Q9Y261 457 aaPredicted RBP9.78□□□□□ -0.84
LAMA4-201ENST00000230538 NUTF2P61970 127 aaKnown RBP9.78□□□□□ -0.84
LAMA4-201ENST00000230538 ZNF414Q96IQ9 312 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 CBLN4Q9NTU7 201 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 TM4SF5O14894 197 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 FBXL15Q9H469 300 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 CHCHD2Q9Y6H1 151 aaPredicted RBP9.78□□□□□ -0.84
LAMA4-201ENST00000230538 A0A1W2PR77 199 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 M0R381 172 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 CELA3AP09093 270 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 TUBA4BQ9H853 241 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 FBXL7Q9UJT9 491 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 TRAV24A0A0B4J272 114 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 A1L4Q6 167 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 H7C1H1 209 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 CGAP01215 116 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 C1QL2Q7Z5L3 287 aa9.78□□□□□ -0.84
LAMA4-201ENST00000230538 NPIPB9F8W1W9 429 aa9.77□□□□□ -0.84
LAMA4-201ENST00000230538 NPIPB7O75200 414 aa9.77□□□□□ -0.84
LAMA4-201ENST00000230538 IGFBP2P18065 325 aa9.77□□□□□ -0.84
LAMA4-201ENST00000230538 TFF3Q07654 80 aa9.77□□□□□ -0.84
LAMA4-201ENST00000230538 FAM27E3Q08E93 113 aa9.77□□□□□ -0.84
LAMA4-201ENST00000230538 OSR1Q8TAX0 266 aaPredicted RBP9.77□□□□□ -0.84
LAMA4-201ENST00000230538 C18orf15Q96N68 181 aa9.77□□□□□ -0.84
LAMA4-201ENST00000230538 LRRC37AA6NMS7 1700 aa9.77□□□□□ -0.84
LAMA4-201ENST00000230538 SPAG17Q6Q759 2223 aa9.77□□□□□ -0.84
LAMA4-201ENST00000230538 C12orf77C9JDV5 145 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 VENTXO95231 258 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 CD8AP01732 235 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 CECR9P0C854 216 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 PRELID3AQ96N28 172 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 PSME4Q14997 1843 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 RAMP1O60894 148 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 TSPAN13O95857 204 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 NBEAP1P0C6P0 100 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 GPX4P36969 197 aaPredicted RBP9.77□□□□□ -0.85
LAMA4-201ENST00000230538 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.77□□□□□ -0.85
LAMA4-201ENST00000230538 TM2D1Q9BX74 207 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 PATJQ8NI35 1801 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 OR11H12B2RN74 326 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 OR11H1Q8NG94 326 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 OR11H2Q8NH07 326 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 C2orf88Q9BSF0 95 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 GGACTQ9BVM4 153 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 GP6Q9HCN6 339 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 TRAV8-6A0A0B4J262 113 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 SHISA3A0PJX4 238 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 ITLN2Q8WWU7 325 aaPredicted RBP9.77□□□□□ -0.85
LAMA4-201ENST00000230538 CCDC88CQ9P219 2028 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 DPM3Q9P2X0 92 aa9.77□□□□□ -0.85
LAMA4-201ENST00000230538 FOXA3P55318 350 aaPredicted RBP9.76□□□□□ -0.85
LAMA4-201ENST00000230538 PPP1R27Q86WC6 154 aa9.76□□□□□ -0.85
LAMA4-201ENST00000230538 RCC1LQ96I51 464 aaKnown RBP9.76□□□□□ -0.85
LAMA4-201ENST00000230538 DUX3Q96PT4 197 aa9.76□□□□□ -0.85
LAMA4-201ENST00000230538 IL36BQ9NZH7 164 aa9.76□□□□□ -0.85
LAMA4-201ENST00000230538 IGKV1D-43A0A0B4J1Z2 117 aa9.76□□□□□ -0.85
LAMA4-201ENST00000230538 RTN4RL2Q86UN3 420 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms