RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 COX7A1P24310 79 aa12.07□□□□□ -0.48
CCDC47-201ENST00000225726 BPIFCQ8NFQ6 507 aa12.07□□□□□ -0.48
CCDC47-201ENST00000225726 MARVELD3Q96A59 401 aa12.07□□□□□ -0.48
CCDC47-201ENST00000225726 PARP11Q9NR21 331 aa12.07□□□□□ -0.48
CCDC47-201ENST00000225726 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
CCDC47-201ENST00000225726 IGHV4-39P01824 125 aa12.07□□□□□ -0.48
CCDC47-201ENST00000225726 VDAC2P45880 294 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-201ENST00000225726 PDLIM4P50479 330 aa12.07□□□□□ -0.48
CCDC47-201ENST00000225726 DLX1P56177 255 aa12.07□□□□□ -0.48
CCDC47-201ENST00000225726 HSPE1P61604 102 aaKnown RBP12.07□□□□□ -0.48
CCDC47-201ENST00000225726 ATP6V1FQ16864 119 aa12.07□□□□□ -0.48
CCDC47-201ENST00000225726 HIPK2Q9H2X6 1198 aa12.07□□□□□ -0.48
CCDC47-201ENST00000225726 SAA1P0DJI8 122 aaPredicted RBP12.06□□□□□ -0.48
CCDC47-201ENST00000225726 ARF6P62330 175 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 S100A12P80511 92 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 OR8G2PQ6IF36 304 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 PNKDQ8N490 385 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 PMS2P5A8MQ11 134 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 SLC25A24Q6NUK1 477 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 OR4P4Q8NGL7 312 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 OR2G3Q8NGZ4 309 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 RBMXL1Q96E39 390 aaKnown RBP12.06□□□□□ -0.48
CCDC47-201ENST00000225726 ZNF257Q9Y2Q1 563 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 OR51B2Q9Y5P1 312 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 A8MXK9 166 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 TMEM182Q6ZP80 229 aaPredicted RBP12.06□□□□□ -0.48
CCDC47-201ENST00000225726 C1orf122Q6ZSJ8 110 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 OR4A5Q8NH83 315 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 SCGB1C1Q8TD33 95 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 PINX1Q96BK5 328 aaKnown RBP12.06□□□□□ -0.48
CCDC47-201ENST00000225726 MMP26Q9NRE1 261 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 FKBP11Q9NYL4 201 aa12.06□□□□□ -0.48
CCDC47-201ENST00000225726 C15orf62A8K5M9 175 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 ENSAO43768 121 aaKnown RBP12.05□□□□□ -0.48
CCDC47-201ENST00000225726 OR8U8P0C7N1 319 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 FABP9Q0Z7S8 132 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 Q6ZRG5 221 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 OR11H6Q8NGC7 330 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 OR10P1Q8NGE3 313 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 HEYLQ9NQ87 328 aaPredicted RBP12.05□□□□□ -0.48
CCDC47-201ENST00000225726 KBTBD11O94819 623 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 GPX4P36969 197 aaPredicted RBP12.05□□□□□ -0.48
CCDC47-201ENST00000225726 RPS16P62249 146 aaKnown RBP12.05□□□□□ -0.48
CCDC47-201ENST00000225726 PRB3Q04118 309 aaPredicted RBP12.05□□□□□ -0.48
CCDC47-201ENST00000225726 BPESC1Q9GZL8 116 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 UMAD1C9J7I0 102 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 PRTN3P24158 256 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 ZFP36P26651 326 aaKnown RBP12.05□□□□□ -0.48
CCDC47-201ENST00000225726 SRSF1Q07955 248 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCDC47-201ENST00000225726 LRRC75BQ2VPJ9 315 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 BTNL8Q6UX41 500 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 IL34Q6ZMJ4 242 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 VSTM2AQ8TAG5 236 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 TMEM147Q9BVK8 224 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 ENY2Q9NPA8 101 aa12.05□□□□□ -0.48
CCDC47-201ENST00000225726 TET2Q6N021 2002 aaPredicted RBP12.04□□□□□ -0.48
CCDC47-201ENST00000225726 DOPEY1Q5JWR5 2465 aa12.04□□□□□ -0.48
CCDC47-201ENST00000225726 LY6LH3BQJ8 138 aa12.04□□□□□ -0.48
CCDC47-201ENST00000225726 AGPAT2O15120 278 aa12.04□□□□□ -0.48
CCDC47-201ENST00000225726 RUNX1Q01196 453 aa12.04□□□□□ -0.48
CCDC47-201ENST00000225726 CLDND2Q8NHS1 167 aa12.04□□□□□ -0.48
CCDC47-201ENST00000225726 IGHV1-3A0A0C4DH29 117 aa12.04□□□□□ -0.48
CCDC47-201ENST00000225726 CAMLGP49069 296 aa12.04□□□□□ -0.48
CCDC47-201ENST00000225726 ETV3LQ6ZN32 361 aa12.04□□□□□ -0.48
CCDC47-201ENST00000225726 DCHS2Q6V1P9 2916 aa12.04□□□□□ -0.48
CCDC47-201ENST00000225726 IFNA10P01566 189 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 IGLV2-23P01705 113 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 PRH1P02810 166 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 F2RL1P55085 397 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 ETFRF1Q6IPR1 90 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 THNSL2Q86YJ6 484 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 TMEM167AQ8TBQ9 72 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 RPEQ96AT9 228 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 WDR61Q9GZS3 305 aaKnown RBP12.03□□□□□ -0.48
CCDC47-201ENST00000225726 HRH4Q9H3N8 390 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 TREM1Q9NP99 234 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 SIRT7Q9NRC8 400 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 INSIG2Q9Y5U4 225 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 KPTNQ9Y664 436 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 USF1P22415 310 aaPredicted RBP12.03□□□□□ -0.48
CCDC47-201ENST00000225726 LMO4P61968 165 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 PRCDQ00LT1 54 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 UQCC3Q6UW78 93 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 OR5B3Q8NH48 314 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 LYPD6BQ8NI32 183 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 RFNGQ9Y644 331 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 LGALS7P47929 136 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 VWC2Q2TAL6 325 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 VMA21Q3ZAQ7 101 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 RXFP4Q8TDU9 374 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 PSMG3Q9BT73 122 aaPredicted RBP12.03□□□□□ -0.48
CCDC47-201ENST00000225726 UQCC1Q9NVA1 299 aa12.03□□□□□ -0.48
CCDC47-201ENST00000225726 TEX50A0A1B0GTY4 177 aa12.02□□□□□ -0.48
CCDC47-201ENST00000225726 UBE2L5PA0A1B0GUS4 154 aa12.02□□□□□ -0.48
CCDC47-201ENST00000225726 ODF3BA8MYP8 253 aa12.02□□□□□ -0.48
CCDC47-201ENST00000225726 C1orf196B1AJZ1 125 aa12.02□□□□□ -0.48
CCDC47-201ENST00000225726 COX6B1P14854 86 aa12.02□□□□□ -0.48
CCDC47-201ENST00000225726 PAX2Q02962 417 aa12.02□□□□□ -0.48
CCDC47-201ENST00000225726 PJVKQ0ZLH3 352 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms