RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 FBXL15Q9H469 300 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 BET1LQ9NYM9 111 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 PRR13Q9NZ81 148 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 MMP24Q9Y5R2 645 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 ALG5Q9Y673 324 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 ACANP16112 2415 aa10.35□□□□□ -0.75
PHGDH-220ENST00000641570 GOSR2O14653 212 aa10.35□□□□□ -0.75
PHGDH-220ENST00000641570 IFNA17P01571 189 aa10.35□□□□□ -0.75
PHGDH-220ENST00000641570 RNASE1P07998 156 aaKnown RBP10.35□□□□□ -0.75
PHGDH-220ENST00000641570 SULT1A3P0DMM9 295 aa10.35□□□□□ -0.75
PHGDH-220ENST00000641570 SULT1A4P0DMN0 295 aa10.35□□□□□ -0.75
PHGDH-220ENST00000641570 MAS1LP35410 378 aa10.35□□□□□ -0.75
PHGDH-220ENST00000641570 UBA52P62987 128 aaKnown RBP10.35□□□□□ -0.75
PHGDH-220ENST00000641570 ANKRD55Q3KP44 614 aa10.35□□□□□ -0.75
PHGDH-220ENST00000641570 FOXRED2Q8IWF2 684 aa10.35□□□□□ -0.75
PHGDH-220ENST00000641570 OR2T6Q8NHC8 308 aa10.35□□□□□ -0.75
PHGDH-220ENST00000641570 HINT2Q9BX68 163 aa10.35□□□□□ -0.75
PHGDH-220ENST00000641570 CYB5BO43169 146 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 NDUFA3O95167 84 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 CA2P00918 260 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 FGF2P09038 288 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 HLA-GP17693 338 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 CNTFRP26992 372 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 HOXA1P49639 335 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-220ENST00000641570 F2RL1P55085 397 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 SMCO1Q147U7 214 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 ZNF585BQ52M93 769 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 LYZL2Q7Z4W2 148 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 SLC35E3Q7Z769 313 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 Q8N6K4 173 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 C5orf56Q8N8D9 126 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 LRTM2Q8N967 370 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 GRPEL2Q8TAA5 225 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 PARP11Q9NR21 331 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-220ENST00000641570 MGAT4CQ9UBM8 478 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 SIGLEC9Q9Y336 463 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 OR51B2Q9Y5P1 312 aa10.34□□□□□ -0.75
PHGDH-220ENST00000641570 F8P00451 2351 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 CELSR1Q9NYQ6 3014 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 A0A1B0GU03 582 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 SCGB1D2O95969 90 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 HLA-DRB1P01911 266 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 VDAC2P45880 294 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-220ENST00000641570 RPL27AP46776 148 aaKnown RBP10.33□□□□□ -0.76
PHGDH-220ENST00000641570 OR2B8PP59922 312 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 TMEM267Q0VDI3 215 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-220ENST00000641570 POU2AF1Q16633 256 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 PRSS8Q16651 343 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 IAH1Q2TAA2 248 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-220ENST00000641570 GGNBP1Q5YKI7 109 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 TMEM167AQ8TBQ9 72 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 PIFOQ8TCI5 191 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 ARPC1AQ92747 370 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 SEC22AQ96IW7 307 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 FYTTD1Q96QD9 318 aaKnown RBP10.33□□□□□ -0.76
PHGDH-220ENST00000641570 GON7Q9BXV9 100 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 ZFP57Q9NU63 452 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 GSKIPQ9P0R6 139 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 CACNG5Q9UF02 275 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 NAV3Q8IVL0 2385 aa10.33□□□□□ -0.76
PHGDH-220ENST00000641570 TLN2Q9Y4G6 2542 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 A0A1W2PN81 502 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 FAM181BA6NEQ2 426 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 CEBPZOSA8MTT3 80 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 UPK2O00526 184 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 MED6O75586 246 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 IGLV2-23P01705 113 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 CHRNA7P36544 502 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 CYCSP99999 105 aaKnown RBP10.32□□□□□ -0.76
PHGDH-220ENST00000641570 FXYD3Q14802 87 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 PUSL1Q8N0Z8 303 aaKnown RBP10.32□□□□□ -0.76
PHGDH-220ENST00000641570 FAM71E2Q8N5Q1 922 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 Q8N9W7 124 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 OR1L8Q8NGR8 309 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 OR5B3Q8NH48 314 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 LHFPL5Q8TAF8 219 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 RITA1Q96K30 269 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 ZNF430Q9H8G1 570 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-220ENST00000641570 PLEKHA3Q9HB20 300 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 NSG2Q9Y328 171 aa10.32□□□□□ -0.76
PHGDH-220ENST00000641570 ZANQ9Y493 2812 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 HIVEP1P15822 2718 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 C7orf66A4D0T2 115 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 C15orf61A6NNL5 157 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 SRRM4A7MD48 611 aaKnown RBP10.31□□□□□ -0.76
PHGDH-220ENST00000641570 AP4M1O00189 453 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 CHST1O43916 411 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 ADAP1O75689 374 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 IGKV1-39P01597 117 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 IGKV1-5P01602 117 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 IGKV1D-39P04432 117 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 PET100P0DJ07 73 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 PVALBP20472 110 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-220ENST00000641570 BRWD1-AS2P59051 145 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 SLC35B1P78383 322 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 OR4F5Q8NH21 305 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 GPR146Q96CH1 333 aa10.31□□□□□ -0.76
PHGDH-220ENST00000641570 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
PHGDH-220ENST00000641570 HIPK2Q9H2X6 1198 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms