RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 NPVFQ9HCQ7 196 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 IGHV3-66A0A0C4DH42 116 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 C20orf202A1L168 122 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 HMSDA8MTL9 139 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 IGKV3-15P01624 115 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 TMEM241Q24JQ0 296 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 DNM1P46Q6ZS02 220 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 C5orf24Q7Z6I8 188 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 NABP1Q96AH0 204 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 MRPL20Q9BYC9 149 aaKnown RBP8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 NAT8BQ9UHF3 227 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 PXMP4Q9Y6I8 212 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 HELZP42694 1942 aaKnown RBP8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 C7orf66A4D0T2 115 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 PRB1P04280 392 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 PGA5P0DJD9 388 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 COL8A1P27658 744 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 B3GALT5-AS1P59052 145 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 AANATQ16613 207 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 Q5BKY6 102 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 RBPMS2Q6ZRY4 209 aaKnown RBP8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 DTX1Q86Y01 620 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 BTF3L4Q96K17 158 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 OR4C12Q96R67 309 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 RNF24Q9Y225 148 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 SELENOKQ9Y6D0 94 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 COL6A3P12111 3177 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 DMDP11532 3685 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 F8VVB4 439 aa8.52□□□□□ -1.04
SMARCA1-205ENST00000617310 F8VWA3 439 aa8.52□□□□□ -1.04
SMARCA1-205ENST00000617310 RNF144BQ7Z419 303 aa8.52□□□□□ -1.04
SMARCA1-205ENST00000617310 IGKV1-12A0A0C4DH73 117 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 KBTBD11-OT1A0A1B0GTJ5 212 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 LOC102723971A0A1B0GUV8 181 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 DPRXA6NFQ7 191 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 HSBP1O75506 76 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 IGKV1D-12P01611 117 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 RD3LP0DJH9 198 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 FAM24BQ8N5W8 94 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 OR2T10Q8NGZ9 312 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 ISOC2Q96AB3 205 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 PQLC2LA1A4F0 135 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 ZNF880Q6PDB4 577 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 CHAC2Q8WUX2 184 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 SLC35B3Q9H1N7 401 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 CRIM1Q9NZV1 1036 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 SLC25A15Q9Y619 301 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 DOCK11Q5JSL3 2073 aa8.52□□□□□ -1.05
SMARCA1-205ENST00000617310 ARPC4-TTLL3A0A0A6YYG9 625 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 RBFOX3A6NFN3 312 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 PF4P02776 101 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 USF1P22415 310 aaPredicted RBP8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 CA7P43166 264 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 TNFRSF9Q07011 255 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 SLC35E3Q7Z769 313 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 LDLRAD3Q86YD5 345 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 FAM90A1Q86YD7 464 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 OR5AU1Q8NGC0 362 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 ALX4Q9H161 411 aaPredicted RBP8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 TMEM167BQ9NRX6 74 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 HIGD1AQ9Y241 93 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 TRGV3P03979 118 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 HKR1P10072 659 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 CRYGSP22914 178 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 H2BFSP57053 126 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 CLLU1Q5K131 121 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 GLRX5Q86SX6 157 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 SELENOHQ8IZQ5 122 aaKnown RBP8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 ZNF524Q96C55 264 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 WDR61Q9GZS3 305 aaKnown RBP8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 PLXNA3P51805 1871 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 KIAA1324LA8MWY0 1029 aaPredicted RBP8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 B3GALNT1O75752 331 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 PMCHP20382 165 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 MRPL54Q6P161 138 aaKnown RBP8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 BRD3OSQ6XYD6 125 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 C9orf62Q8N4C0 152 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 NPDC1Q9NQX5 325 aaPredicted RBP8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 DYSFO75923 2080 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 PLAURQ03405 335 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 PIP4P1Q86T03 277 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 C16orf92Q96LL3 132 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 PAXXQ9BUH6 204 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 MMP26Q9NRE1 261 aa8.51□□□□□ -1.05
SMARCA1-205ENST00000617310 IGKV1D-13A0A0B4J2D9 117 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 SEC14L6B5MCN3 397 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 SIGLEC5O15389 551 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 IGKV1-13P0DP09 117 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 GALR1P47211 349 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 C5orf17Q8NAS9 161 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 MBD3L4A6NDZ8 208 aaPredicted RBP8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 MBD3L3A6NE82 208 aaPredicted RBP8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 MBD3L5A6NJ08 208 aaPredicted RBP8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 NPIPB11E5RHQ5 1161 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 PRB4P10163 310 aaPredicted RBP8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 TM4SF20Q53R12 229 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 GBGT1Q8N5D6 347 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 MBD3L2Q8NHZ7 208 aaPredicted RBP8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 FRMPD3Q5JV73 1810 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 MTORP42345 2549 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms