RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 NECAP1Q8NC96 275 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 OR9G4Q8NGQ1 327 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 OR4A5Q8NH83 315 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 CD300LFQ8TDQ1 290 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 AKIP1Q9NQ31 210 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 BET1LQ9NYM9 111 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 ZNF257Q9Y2Q1 563 aa13.95□□□□□ -0.18
VCX3A-203ENST00000612369 MEIS3P1A6NDR6 274 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 NPIPB5A8MRT5 1133 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 HPRT1P00492 218 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 IGLV1-51P01701 117 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 FCER2P06734 321 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 ZNF735P0CB33 412 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 TAS2R31P59538 309 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 TAS2R46P59540 309 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 RPL8P62917 257 aaKnown RBP13.94□□□□□ -0.18
VCX3A-203ENST00000612369 ATP5G2Q06055 141 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 ZNF818PQ6ZRF7 136 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 GPHA2Q96T91 129 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 SLC2A9Q9NRM0 540 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 EHFQ9NZC4 300 aa13.94□□□□□ -0.18
VCX3A-203ENST00000612369 SMIM31A0A1B0GVY4 71 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 DPPA5A6NC42 116 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 TEX22C9J3V5 150 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 RBMXL2O75526 392 aaKnown RBP13.93□□□□□ -0.18
VCX3A-203ENST00000612369 APOA1P02647 267 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 NCS1P62166 190 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 ZNF45Q02386 682 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 POU2AF1Q16633 256 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 RPEL1Q2QD12 228 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 TMEM17Q86X19 198 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 WWC2-AS2Q96NR7 200 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 RSRP1Q9BUV0 290 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 SIGLEC8Q9NYZ4 499 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 COMMD3Q9UBI1 195 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 ADAM30Q9UKF2 790 aa13.93□□□□□ -0.18
VCX3A-203ENST00000612369 HMX3A6NHT5 357 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 SULT1C2O00338 296 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 DHFRP00374 187 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 PRH1P02810 166 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 CRYGCP07315 174 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 IL6RP08887 468 aaPredicted RBP13.92□□□□□ -0.18
VCX3A-203ENST00000612369 FGF2P09038 288 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 NQO2P16083 231 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 GNRHRP30968 328 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 RFX2P48378 723 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 SYNJ2BPP57105 145 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 VBP1P61758 197 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 DEFA5Q01523 94 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 EXOSC2Q13868 293 aaKnown RBP13.92□□□□□ -0.18
VCX3A-203ENST00000612369 OR4A47Q6IF82 309 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 SSX9Q7RTT3 188 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 OR5H2Q8NGV7 314 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 MOB3AQ96BX8 217 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 FYTTD1Q96QD9 318 aaKnown RBP13.92□□□□□ -0.18
VCX3A-203ENST00000612369 ZNF2Q9BSG1 426 aaPredicted RBP13.92□□□□□ -0.18
VCX3A-203ENST00000612369 PLEKHA2Q9HB19 425 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 U3KQK5 164 aa13.92□□□□□ -0.18
VCX3A-203ENST00000612369 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.91□□□□□ -0.18
VCX3A-203ENST00000612369 H0Y980 276 aa13.91□□□□□ -0.18
VCX3A-203ENST00000612369 TRBV12-3P01733 135 aa13.91□□□□□ -0.18
VCX3A-203ENST00000612369 EIF4EP06730 217 aaKnown RBP13.91□□□□□ -0.18
VCX3A-203ENST00000612369 HLA-GP17693 338 aa13.91□□□□□ -0.18
VCX3A-203ENST00000612369 RORCP51449 518 aa13.91□□□□□ -0.18
VCX3A-203ENST00000612369 AADACL3Q5VUY0 350 aa13.91□□□□□ -0.18
VCX3A-203ENST00000612369 OR6F1Q8NGZ6 308 aa13.91□□□□□ -0.18
VCX3A-203ENST00000612369 GPX8Q8TED1 209 aa13.91□□□□□ -0.18
VCX3A-203ENST00000612369 SCPEP1Q9HB40 452 aa13.91□□□□□ -0.18
VCX3A-203ENST00000612369 HRASLSQ9HDD0 168 aa13.91□□□□□ -0.18
VCX3A-203ENST00000612369 PEMTQ9UBM1 199 aa13.91□□□□□ -0.18
VCX3A-203ENST00000612369 E7EUB6 86 aa13.9□□□□□ -0.18
VCX3A-203ENST00000612369 PMP2P02689 132 aa13.9□□□□□ -0.18
VCX3A-203ENST00000612369 HIST1H1BP16401 226 aaKnown RBP13.9□□□□□ -0.18
VCX3A-203ENST00000612369 PSMB6P28072 239 aa13.9□□□□□ -0.18
VCX3A-203ENST00000612369 KLK9Q2XQG4 91 aa13.9□□□□□ -0.18
VCX3A-203ENST00000612369 C15orf32Q32M92 178 aa13.9□□□□□ -0.18
VCX3A-203ENST00000612369 IL34Q6ZMJ4 242 aa13.9□□□□□ -0.18
VCX3A-203ENST00000612369 OR51H1Q8NH63 302 aa13.9□□□□□ -0.18
VCX3A-203ENST00000612369 COMMD9Q9P000 198 aa13.9□□□□□ -0.18
VCX3A-203ENST00000612369 KLK9Q9UKQ9 250 aa13.9□□□□□ -0.18
VCX3A-203ENST00000612369 A0A1B0GW64 132 aa13.89□□□□□ -0.19
VCX3A-203ENST00000612369 BMPR1BO00238 502 aa13.89□□□□□ -0.19
VCX3A-203ENST00000612369 OR2J3O76001 311 aa13.89□□□□□ -0.19
VCX3A-203ENST00000612369 CTRB1P17538 263 aa13.89□□□□□ -0.19
VCX3A-203ENST00000612369 F2RP25116 425 aa13.89□□□□□ -0.19
VCX3A-203ENST00000612369 CTRB2Q6GPI1 263 aa13.89□□□□□ -0.19
VCX3A-203ENST00000612369 LYSMD2Q8IV50 215 aa13.89□□□□□ -0.19
VCX3A-203ENST00000612369 CMTM1Q8IZ96 169 aa13.89□□□□□ -0.19
VCX3A-203ENST00000612369 SRSF8Q9BRL6 282 aaKnown RBP13.89□□□□□ -0.19
VCX3A-203ENST00000612369 FBXL7Q9UJT9 491 aa13.89□□□□□ -0.19
VCX3A-203ENST00000612369 UPK2O00526 184 aa13.88□□□□□ -0.19
VCX3A-203ENST00000612369 PGLYRP1O75594 196 aaPredicted RBP13.88□□□□□ -0.19
VCX3A-203ENST00000612369 CSN3P07498 182 aa13.88□□□□□ -0.19
VCX3A-203ENST00000612369 THOC7Q6I9Y2 204 aaKnown RBP13.88□□□□□ -0.19
VCX3A-203ENST00000612369 LPCAT3Q6P1A2 487 aa13.88□□□□□ -0.19
VCX3A-203ENST00000612369 MZT2AQ6P582 158 aa13.88□□□□□ -0.19
VCX3A-203ENST00000612369 CADM3Q8N126 398 aa13.88□□□□□ -0.19
VCX3A-203ENST00000612369 DMBX1Q8NFW5 382 aa13.88□□□□□ -0.19
VCX3A-203ENST00000612369 AP3S1Q92572 193 aa13.88□□□□□ -0.19
VCX3A-203ENST00000612369 FANCD2OSQ96PS1 177 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms