RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 Q8N1Y9 231 aa13.24□□□□□ -0.29
PRKN-208ENST00000610470 YIPF6Q96EC8 236 aa13.24□□□□□ -0.29
PRKN-208ENST00000610470 AIFM2Q9BRQ8 373 aa13.24□□□□□ -0.29
PRKN-208ENST00000610470 CCL28Q9NRJ3 127 aa13.24□□□□□ -0.29
PRKN-208ENST00000610470 ADAM30Q9UKF2 790 aa13.24□□□□□ -0.29
PRKN-208ENST00000610470 DNAH7Q8WXX0 4024 aa13.24□□□□□ -0.29
PRKN-208ENST00000610470 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.23□□□□□ -0.29
PRKN-208ENST00000610470 A8MZ25 164 aa13.23□□□□□ -0.29
PRKN-208ENST00000610470 TEX22C9J3V5 150 aa13.23□□□□□ -0.29
PRKN-208ENST00000610470 TNFSF12O43508 249 aa13.23□□□□□ -0.29
PRKN-208ENST00000610470 AIREO43918 545 aa13.23□□□□□ -0.29
PRKN-208ENST00000610470 CSN3P07498 182 aa13.23□□□□□ -0.29
PRKN-208ENST00000610470 IGHV4-30-4P0DP06 118 aa13.23□□□□□ -0.29
PRKN-208ENST00000610470 PTHLHP12272 177 aa13.23□□□□□ -0.29
PRKN-208ENST00000610470 BRWD1-AS2P59051 145 aa13.23□□□□□ -0.29
PRKN-208ENST00000610470 LCN12Q6JVE5 192 aa13.23□□□□□ -0.29
PRKN-208ENST00000610470 FYTTD1Q96QD9 318 aaKnown RBP13.23□□□□□ -0.29
PRKN-208ENST00000610470 STAB2Q8WWQ8 2551 aa13.23□□□□□ -0.29
PRKN-208ENST00000610470 HMX3A6NHT5 357 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 NPIPB5A8MRT5 1133 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 BMPR1BO00238 502 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 XRCC3O43542 346 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 OR2J3O76001 311 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 CATR1Q13166 79 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 C15orf32Q32M92 178 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 SSX9Q7RTT3 188 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 SPAG16Q8N0X2 631 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 Q8N402 240 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 OR5AP2Q8NGF4 316 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 OR4A5Q8NH83 315 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 S100A16Q96FQ6 103 aaKnown RBP13.22□□□□□ -0.29
PRKN-208ENST00000610470 GPHA2Q96T91 129 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 SLC5A7Q9GZV3 580 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 SLC2A9Q9NRM0 540 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 RYR3Q15413 4870 aa13.22□□□□□ -0.29
PRKN-208ENST00000610470 RBFOX2O43251 390 aaKnown RBP eCLIP13.21□□□□□ -0.29
PRKN-208ENST00000610470 DHFRP00374 187 aa13.21□□□□□ -0.29
PRKN-208ENST00000610470 IL6RP08887 468 aaPredicted RBP13.21□□□□□ -0.29
PRKN-208ENST00000610470 ZNF735P0CB33 412 aa13.21□□□□□ -0.29
PRKN-208ENST00000610470 SMIM18P0DKX4 95 aa13.21□□□□□ -0.29
PRKN-208ENST00000610470 FXYD4P59646 89 aa13.21□□□□□ -0.29
PRKN-208ENST00000610470 RPL8P62917 257 aaKnown RBP13.21□□□□□ -0.29
PRKN-208ENST00000610470 GTSCR1Q86UQ5 136 aa13.21□□□□□ -0.29
PRKN-208ENST00000610470 OR2K2Q8NGT1 345 aa13.21□□□□□ -0.29
PRKN-208ENST00000610470 GIMAP1Q8WWP7 306 aa13.21□□□□□ -0.29
PRKN-208ENST00000610470 KCTD12Q96CX2 325 aaKnown RBP13.21□□□□□ -0.29
PRKN-208ENST00000610470 IFT46Q9NQC8 304 aa13.21□□□□□ -0.29
PRKN-208ENST00000610470 C19orf73Q9NVV2 129 aa13.21□□□□□ -0.29
PRKN-208ENST00000610470 BET1LQ9NYM9 111 aa13.21□□□□□ -0.29
PRKN-208ENST00000610470 FCER2P06734 321 aa13.2□□□□□ -0.3
PRKN-208ENST00000610470 CRYGCP07315 174 aa13.2□□□□□ -0.3
PRKN-208ENST00000610470 HLA-GP17693 338 aa13.2□□□□□ -0.3
PRKN-208ENST00000610470 TGFBR1P36897 503 aa13.2□□□□□ -0.3
PRKN-208ENST00000610470 TAS2R31P59538 309 aa13.2□□□□□ -0.3
PRKN-208ENST00000610470 LSM3P62310 102 aaKnown RBP13.2□□□□□ -0.3
PRKN-208ENST00000610470 UBE2NLQ5JXB2 153 aa13.2□□□□□ -0.3
PRKN-208ENST00000610470 BORCS5Q969J3 196 aa13.2□□□□□ -0.3
PRKN-208ENST00000610470 FBXL7Q9UJT9 491 aa13.2□□□□□ -0.3
PRKN-208ENST00000610470 MEIS3P1A6NDR6 274 aa13.19□□□□□ -0.3
PRKN-208ENST00000610470 E7EUB6 86 aa13.19□□□□□ -0.3
PRKN-208ENST00000610470 SULT1C2O00338 296 aa13.19□□□□□ -0.3
PRKN-208ENST00000610470 HPRT1P00492 218 aa13.19□□□□□ -0.3
PRKN-208ENST00000610470 HIST1H1BP16401 226 aaKnown RBP13.19□□□□□ -0.3
PRKN-208ENST00000610470 PSMB6P28072 239 aa13.19□□□□□ -0.3
PRKN-208ENST00000610470 HERV-K104P61576 105 aa13.19□□□□□ -0.3
PRKN-208ENST00000610470 OR4A47Q6IF82 309 aa13.19□□□□□ -0.3
PRKN-208ENST00000610470 CD300LFQ8TDQ1 290 aa13.19□□□□□ -0.3
PRKN-208ENST00000610470 TM2D3Q9BRN9 247 aa13.19□□□□□ -0.3
PRKN-208ENST00000610470 HRASLSQ9HDD0 168 aa13.19□□□□□ -0.3
PRKN-208ENST00000610470 A0A1B0GW64 132 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 GGCTO75223 188 aaKnown RBP13.18□□□□□ -0.3
PRKN-208ENST00000610470 NQO2P16083 231 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 CTRB1P17538 263 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 RPS19P39019 145 aaKnown RBP13.18□□□□□ -0.3
PRKN-208ENST00000610470 MECP2P51608 486 aaKnown RBP13.18□□□□□ -0.3
PRKN-208ENST00000610470 TMEM69Q5SWH9 247 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 ZNF818PQ6ZRF7 136 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 TMEM17Q86X19 198 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 SAMD12Q8N8I0 201 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 MUC7Q8TAX7 377 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 THAP7Q9BT49 309 aaPredicted RBP13.18□□□□□ -0.3
PRKN-208ENST00000610470 FUNDC2Q9BWH2 189 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 EHFQ9NZC4 300 aa13.18□□□□□ -0.3
PRKN-208ENST00000610470 PPP5D1E7EU14 171 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 DEFA4P12838 97 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 AREGP15514 252 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 TAS2R20P59543 309 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 POU2AF1Q16633 256 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 KLK9Q2XQG4 91 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 AADACL3Q5VUY0 350 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 C19orf35Q6ZS72 473 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 OR51H1Q8NH63 302 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 DYNLRB2Q8TF09 96 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 EEF1AKMT3Q96AZ1 226 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 FANCD2OSQ96PS1 177 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 MRPS26Q9BYN8 205 aaKnown RBP13.17□□□□□ -0.3
PRKN-208ENST00000610470 TUBA4BQ9H853 241 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 PLEKHA2Q9HB19 425 aa13.17□□□□□ -0.3
PRKN-208ENST00000610470 KLK9Q9UKQ9 250 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms