RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 OR11H7Q8NGC8 314 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 OR4D10Q8NGI6 311 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 OR5M8Q8NGP6 311 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 ZNF486Q96H40 463 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-203ENST00000598359 SLC25A21Q9BQT8 299 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-203ENST00000598359 GPR61Q9BZJ8 451 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 OR2D2Q9H210 308 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 FLVCR2Q9UPI3 526 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 TENM3Q9P273 2699 aa10.69□□□□□ -0.7
SCAF1-203ENST00000598359 DNAH9Q9NYC9 4486 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 TRBV6-7A0A0A0MS04 114 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 MEIS3P1A6NDR6 274 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 SEC14L6B5MCN3 397 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 I3L521 148 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 CA2P00918 260 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 CBX3Q13185 183 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 FHL3Q13643 280 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 ARFRP1Q13795 201 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 ACTBL2Q562R1 376 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 ZNF660Q6AZW8 331 aaPredicted RBP10.68□□□□□ -0.7
SCAF1-203ENST00000598359 PPP1R27Q86WC6 154 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 OR51S1Q8NGJ8 323 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 OR1N2Q8NGR9 330 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 OR10J5Q8NHC4 309 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 NUDCD2Q8WVJ2 157 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 UBE2E2Q96LR5 201 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 MS4A10Q96PG2 267 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 GINS4Q9BRT9 223 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 CABLES2Q9BTV7 478 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 GPN1Q9HCN4 374 aaPredicted RBP10.68□□□□□ -0.7
SCAF1-203ENST00000598359 SDHAF2Q9NX18 166 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 VSIG4Q9Y279 399 aa10.68□□□□□ -0.7
SCAF1-203ENST00000598359 DISC1C4P0D8 188 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 SLC25A17O43808 307 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 APOA2P02652 100 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 ANXA3P12429 323 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 GNG2P59768 71 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 VAX1Q5SQQ9 334 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 C11orf87Q6NUJ2 197 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 LFNGQ8NES3 379 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 PRR25Q96S07 402 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 PRRT1Q99946 306 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 TINAGL1Q9GZM7 467 aaPredicted RBP10.67□□□□□ -0.7
SCAF1-203ENST00000598359 SLC35D1Q9NTN3 355 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 SCP2D1Q9UJQ7 156 aa10.67□□□□□ -0.7
SCAF1-203ENST00000598359 FOXA2Q9Y261 457 aaPredicted RBP10.67□□□□□ -0.7
SCAF1-203ENST00000598359 CREBL2O60519 120 aaPredicted RBP10.66□□□□□ -0.7
SCAF1-203ENST00000598359 IGHV3-11P01762 117 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 CRIP2P52943 208 aaPredicted RBP10.66□□□□□ -0.7
SCAF1-203ENST00000598359 NKX2-5P52952 324 aaPredicted RBP10.66□□□□□ -0.7
SCAF1-203ENST00000598359 ZNF616Q08AN1 781 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 PJVKQ0ZLH3 352 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 RNASE10Q5GAN6 216 aaKnown RBP10.66□□□□□ -0.7
SCAF1-203ENST00000598359 C9orf66Q5T8R8 295 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 UNQ5815/PRO19632Q6UWF5 114 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 PDPNQ86YL7 162 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 BVESQ8NE79 360 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 OR13C8Q8NGS7 320 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 GRPEL2Q8TAA5 225 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 SNAPC3Q92966 411 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 FLYWCH2Q96CP2 140 aaKnown RBP10.66□□□□□ -0.7
SCAF1-203ENST00000598359 TSNAXQ99598 290 aaKnown RBP10.66□□□□□ -0.7
SCAF1-203ENST00000598359 TOLLIPQ9H0E2 274 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 IFT46Q9NQC8 304 aa10.66□□□□□ -0.7
SCAF1-203ENST00000598359 RBM7Q9Y580 266 aaKnown RBP10.66□□□□□ -0.7
SCAF1-203ENST00000598359 M0QYG6 137 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 RGS13O14921 159 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 IGLV2-23P01705 113 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 ANXA7P20073 488 aaKnown RBP10.65□□□□□ -0.7
SCAF1-203ENST00000598359 ECI1P42126 302 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 SLURP1P55000 103 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 SSBP2P81877 361 aaPredicted RBP10.65□□□□□ -0.7
SCAF1-203ENST00000598359 RUNX1Q01196 453 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 ZNF562Q6V9R5 426 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 IDO2Q6ZQW0 420 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 HOGA1Q86XE5 327 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 ARRDC1Q8N5I2 433 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 GVQW1Q8N7I0 195 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.65□□□□□ -0.7
SCAF1-203ENST00000598359 DCUN1D4Q92564 292 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 ARPC1AQ92747 370 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 RNF5Q99942 180 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 SEC22CQ9BRL7 303 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 ST6GALNAC5Q9BVH7 336 aa10.65□□□□□ -0.7
SCAF1-203ENST00000598359 IGHV4OR15-8A0A075B7B6 117 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 A0A087WW49 117 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 SRRM4A7MD48 611 aaKnown RBP10.64□□□□□ -0.71
SCAF1-203ENST00000598359 SPDEFO95238 335 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 OR8U8P0C7N1 319 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 CXCL3P19876 107 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 FXYD3Q14802 87 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 H1FOOQ8IZA3 346 aaPredicted RBP10.64□□□□□ -0.71
SCAF1-203ENST00000598359 BEST4Q8NFU0 473 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 ZFAND1Q8TCF1 268 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 HYLS1Q96M11 299 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 HARBI1Q96MB7 349 aa10.64□□□□□ -0.71
SCAF1-203ENST00000598359 LINC00473A8K010 186 aa10.63□□□□□ -0.71
SCAF1-203ENST00000598359 SSNA1O43805 119 aa10.63□□□□□ -0.71
SCAF1-203ENST00000598359 CNIH1O95406 144 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms