RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 HSMCR30P0CW71 290 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 CGB3P0DN86 165 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 CGB7P0DN87 165 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 GALP22466 123 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 UCP1P25874 307 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 FGF9P31371 208 aaPredicted RBP2.95□□□□□ -1.94
VMP1-205ENST00000587470 ZNF93P35789 620 aaPredicted RBP2.95□□□□□ -1.94
VMP1-205ENST00000587470 OR3A4PP47883 348 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 POU3F4P49335 361 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 DLX6P56179 175 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 CAV3P56539 151 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 FGF12P61328 243 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 GNB2P62879 340 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 SMIM21Q3B7S5 101 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 TIMM50Q3ZCQ8 353 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 FAHD2BQ6P2I3 314 aaPredicted RBP2.95□□□□□ -1.94
VMP1-205ENST00000587470 TCF23Q7RTU1 214 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 SLC36A1Q7Z2H8 476 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 MKXQ8IYA7 352 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 FAM58AQ8N1B3 248 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 ZNF561Q8N587 486 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 TMEM104Q8NE00 496 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 OR8B3Q8NGG8 313 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 OR4D6Q8NGJ1 314 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 OR51T1Q8NGJ9 327 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 ZNF418Q8TF45 676 aaPredicted RBP2.95□□□□□ -1.94
VMP1-205ENST00000587470 TSEN15Q8WW01 171 aaKnown RBP2.95□□□□□ -1.94
VMP1-205ENST00000587470 UFD1Q92890 307 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 TNFRSF14Q92956 283 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 FAHD2AQ96GK7 314 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 OR8B2Q96RD0 313 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 TBX15Q96SF7 602 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 ST6GALNAC5Q9BVH7 336 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 TMED9Q9BVK6 235 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 MAGT1Q9H0U3 335 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 RHOFQ9HBH0 211 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 NDUFB11Q9NX14 153 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 IL36GQ9NZH8 169 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 PIPOXQ9P0Z9 390 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 RABL2AQ9UBK7 228 aaPredicted RBP2.95□□□□□ -1.94
VMP1-205ENST00000587470 CLN8Q9UBY8 286 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 MGAT4AQ9UM21 535 aa2.95□□□□□ -1.94
VMP1-205ENST00000587470 A0A087WXM4 84 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 A0A0G2JMP0 313 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 CENPVL3A0A0U1RRI6 287 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 A0A0X1KG70 313 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 METTL21EPA6NDL7 271 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 TMEM14DPA8MWL7 114 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 H0Y9J4 135 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 CCRL2O00421 344 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 SLC22A1O15245 554 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 NDUFB3O43676 98 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 KBTBD11O94819 623 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 TNFAIP8O95379 198 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 OR2H2O95918 312 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 HAND1O96004 215 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 MAS1P04201 325 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 HCKP08631 526 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 PRKACAP17612 351 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 PRTN3P24158 256 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 PSMA1P25786 263 aaKnown RBP2.94□□□□□ -1.94
VMP1-205ENST00000587470 PSMB9P28065 219 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 GABRA2P47869 451 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 DLX1P56177 255 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 OR10A3P58181 314 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 ARF6P62330 175 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 RPL23AP62750 156 aaKnown RBP2.94□□□□□ -1.94
VMP1-205ENST00000587470 PPP3R1P63098 170 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 PAX5Q02548 391 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 TRAM1Q15629 374 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 ZNF79Q15937 498 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 ECSCRQ19T08 205 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 PIGYQ3MUY2 71 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 SLC22A6Q4U2R8 563 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 HSD17B12Q53GQ0 312 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 LRRC10Q5BKY1 277 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 SPIN3Q5JUX0 258 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 OR10K2Q6IF99 312 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 HCP5Q6MZN7 132 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 METAP1DQ6UB28 335 aaPredicted RBP2.94□□□□□ -1.94
VMP1-205ENST00000587470 Q8IYB0 196 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 OR4S1Q8NGB4 309 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 OR4M2Q8NGB6 313 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 OR10K1Q8NGX5 313 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 TNFAIP8L1Q8WVP5 186 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 YIPF6Q96EC8 236 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 MRPS24Q96EL2 167 aaKnown RBP2.94□□□□□ -1.94
VMP1-205ENST00000587470 UQCC2Q9BRT2 126 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 OR51E2Q9H255 320 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 RNF167Q9H6Y7 350 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 ELL3Q9HB65 397 aaPredicted RBP2.94□□□□□ -1.94
VMP1-205ENST00000587470 NEK6Q9HC98 313 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 C19orf12Q9NSK7 152 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 TXNL4BQ9NX01 149 aaKnown RBP2.94□□□□□ -1.94
VMP1-205ENST00000587470 AK6Q9Y3D8 172 aaKnown RBP2.94□□□□□ -1.94
VMP1-205ENST00000587470 SOX21Q9Y651 276 aaPredicted RBP2.94□□□□□ -1.94
VMP1-205ENST00000587470 KPTNQ9Y664 436 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 PRKDCP78527 4128 aaKnown RBP2.94□□□□□ -1.94
VMP1-205ENST00000587470 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
VMP1-205ENST00000587470 FAM240BA0A1B0GVZ2 78 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms