RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 F2RL1P55085 397 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 RPL30P62888 115 aaKnown RBP11.43□□□□□ -0.58
COMMD4-225ENST00000569245 SLC35B1P78383 322 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 CBX3Q13185 183 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 TMEM187Q14656 261 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 Q8N9W7 124 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 GLYATL2Q8WU03 294 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 DDB2Q92466 427 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 TP53RKQ96S44 253 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 PLSCR3Q9NRY6 295 aa11.43□□□□□ -0.58
COMMD4-225ENST00000569245 LIN7CQ9NUP9 197 aaKnown RBP11.43□□□□□ -0.58
COMMD4-225ENST00000569245 LINC01548A6NM66 108 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 LINC00473A8K010 186 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 AP4M1O00189 453 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 CT45A6P0DMU7 189 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 CT45A5P0DMU8 189 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 CT45A7P0DMV0 189 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 SRPXP78539 464 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 TAGLNQ01995 201 aaKnown RBP11.42□□□□□ -0.58
COMMD4-225ENST00000569245 MMDQ15546 238 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 CADM3Q8N126 398 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 C12orf45Q8N5I9 185 aaPredicted RBP11.42□□□□□ -0.58
COMMD4-225ENST00000569245 LRTM2Q8N967 370 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 OR51H1Q8NH63 302 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 COQ8AQ8NI60 647 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 CASTOR1Q8WTX7 329 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 TMEM56Q96MV1 263 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 PHB2Q99623 299 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 NABP2Q9BQ15 211 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 TMEM222Q9H0R3 208 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 TMEM56-RWDD3S4R434 201 aa11.42□□□□□ -0.58
COMMD4-225ENST00000569245 RBFOX2O43251 390 aaKnown RBP eCLIP11.41□□□□□ -0.58
COMMD4-225ENST00000569245 CDS2O95674 445 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 PF4P02776 101 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 KIR2DS2P43631 304 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 BRWD1-AS2P59051 145 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 ANKRD55Q3KP44 614 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 SP6Q3SY56 376 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 STPG2Q8N412 459 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 ZNF383Q8NA42 475 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 DRAXINQ8NBI3 349 aaPredicted RBP11.41□□□□□ -0.58
COMMD4-225ENST00000569245 CD300LFQ8TDQ1 290 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 CHAC2Q8WUX2 184 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 TCTEX1D2Q8WW35 142 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 IL22RA2Q969J5 263 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 GON7Q9BXV9 100 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 PRELID3BQ9Y3B1 194 aa11.41□□□□□ -0.58
COMMD4-225ENST00000569245 hCG_2014768A0A024R1R8 64 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 PIGBOS1A0A0B4J2F0 54 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 DBX1A6NMT0 343 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 G3V4G9 280 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 H7C2Y5 167 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 SSNA1O43805 119 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 TRAPPC2P0DI81 140 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 TRAPPC2BP0DI82 140 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 RPA2P15927 270 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 CD33P20138 364 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 BCAP31P51572 246 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 LINC00205P59089 165 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 RRAS2P62070 204 aaPredicted RBP11.4□□□□□ -0.58
COMMD4-225ENST00000569245 ZNF585BQ52M93 769 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 SPAG16Q8N0X2 631 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 LGI3Q8N145 548 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 FAM71E2Q8N5Q1 922 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 RITA1Q96K30 269 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 MED28Q9H204 178 aa11.4□□□□□ -0.58
COMMD4-225ENST00000569245 HMX3A6NHT5 357 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 NUDT19A8MXV4 375 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 SERPINE2P07093 398 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 SULT1A3P0DMM9 295 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 SULT1A4P0DMN0 295 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 RRASP10301 218 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 HLA-GP17693 338 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 PDLIM3Q53GG5 364 aaPredicted RBP11.39□□□□□ -0.59
COMMD4-225ENST00000569245 TEX38Q6PEX7 206 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 COMMD1Q8N668 190 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 LHFPL5Q8TAF8 219 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 HSPB9Q9BQS6 159 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 PRR13Q9NZ81 148 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 KIAA1456Q9P272 454 aa11.39□□□□□ -0.59
COMMD4-225ENST00000569245 DUXBA0A1W2PPF3 345 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 H0YJW9 148 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 NBR2O15453 112 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 RAMP3O60896 148 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 FCGR3BO75015 233 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 HPRT1P00492 218 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 APOA2P02652 100 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 VDAC1P21796 283 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 CNTFRP26992 372 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 MC5RP33032 325 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 LPAR6P43657 344 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 RPL23AP62750 156 aaKnown RBP11.38□□□□□ -0.59
COMMD4-225ENST00000569245 FCN2Q15485 313 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 ZNF695Q8IW36 515 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 SELENOHQ8IZQ5 122 aaKnown RBP11.38□□□□□ -0.59
COMMD4-225ENST00000569245 OR4S2Q8NH73 311 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 RBPMSQ93062 196 aaKnown RBP11.38□□□□□ -0.59
COMMD4-225ENST00000569245 PLEKHA2Q9HB19 425 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 SLC35D1Q9NTN3 355 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 262.6 ms