RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 NXF5Q9H1B4 397 aaKnown RBP16.09■□□□□ 0.17
SEMA4B-215ENST00000560089 JKAMPQ9P055 326 aa16.09■□□□□ 0.17
SEMA4B-215ENST00000560089 SPAARA0A1B0GVQ0 90 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 PGLYRP1O75594 196 aaPredicted RBP16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 CRYBB3P26998 211 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 CX3CL1P78423 397 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 MALLQ13021 153 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 COX19Q49B96 90 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 MRPL54Q6P161 138 aaKnown RBP16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 OR2K2Q8NGT1 345 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 C18orf32Q8TCD1 76 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 NUDT22Q9BRQ3 303 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 TMEM70Q9BUB7 260 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 C9orf118A6NHY6 69 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 H3BUT2 72 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 K7EQM0 130 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 GPR183P32249 361 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 TMEM211Q6ICI0 200 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 ZNF788Q6ZQV5 615 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 KIR3DL3Q8N743 410 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 PRTFDC1Q9NRG1 225 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 PPP1R3CQ9UQK1 317 aa16.08■□□□□ 0.16
SEMA4B-215ENST00000560089 SEC16AO15027 2179 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 C2orf72A6NCS6 295 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 HLA-DQA1P01909 254 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 PSG2P11465 335 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 F2RP25116 425 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 PTGDSP41222 190 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 TFF3Q07654 80 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 TRIP6Q15654 476 aaKnown RBP16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 C17orf82Q86X59 251 aaPredicted RBP16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 APCSP02743 223 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 C5orf64Q2M2E5 130 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 NAA38Q9BRA0 125 aaKnown RBP16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 WDR54Q9H977 334 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 PNRC2Q9NPJ4 139 aaKnown RBP16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 V9GYV3 84 aa16.07■□□□□ 0.16
SEMA4B-215ENST00000560089 FREM2Q5SZK8 3169 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 AMY1AP04745 511 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 USF1P22415 310 aaPredicted RBP16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 RAC3P60763 192 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 SRSF7Q16629 238 aaKnown RBP eCLIP16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 H1FNTQ75WM6 255 aaPredicted RBP16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 DTX1Q86Y01 620 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 TMEM147Q9BVK8 224 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 IGHV1OR21-1A0A087WYE8 117 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 TEX48A0A1B0GUV7 120 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 GAGE12HA6NDE8 117 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 CLDN1O95832 211 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 HLA-DRB1P01911 266 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 UQCRFS1P47985 274 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 SEC11AP67812 179 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 CCDC144NLQ6NUI1 221 aa16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 RNASEKQ6P5S7 137 aaKnown RBP16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 TSSC4Q9Y5U2 329 aaPredicted RBP16.06■□□□□ 0.16
SEMA4B-215ENST00000560089 PDCD6O75340 191 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 FBLP22087 321 aaKnown RBP16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 GRB2P62993 217 aaKnown RBP16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 GUSBP11Q6P575 273 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 MRPL21Q7Z2W9 205 aaKnown RBP16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 OSR2Q8N2R0 312 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 PERPQ96FX8 193 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 SCRT2Q9NQ03 307 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 RTTNQ86VV8 2226 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 LILRA5A6NI73 299 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 F5H5K5 113 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 APOA2P02652 100 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 HTR1DP28221 377 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 TCL1AP56279 114 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 CLRN1P58418 232 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 CD300EQ496F6 205 aaPredicted RBP16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 TCTEX1D4Q5JR98 221 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 OR10AG1Q8NH19 301 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 EAF1Q96JC9 268 aaPredicted RBP16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 NPCDR1Q9BY65 106 aa16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 GEMIN7Q9H840 131 aaKnown RBP16.05■□□□□ 0.16
SEMA4B-215ENST00000560089 GPM6AP51674 278 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 MEF2CQ06413 473 aaPredicted RBP16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 MFAP5Q13361 173 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 OR1L1Q8NH94 360 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 ZNF479Q96JC4 524 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 TRAV38-1A0A0B4J264 116 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 CLPSP04118 112 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 OR5A1Q8NGJ0 315 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 OR2T6Q8NHC8 308 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 CELSR3Q9NYQ7 3312 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 F2RL2O00254 374 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 SCTP09683 121 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 FABP6P51161 128 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 C9orf135Q5VTT2 229 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 TMEM14EPQ6UXP3 125 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 TMEM45BQ96B21 275 aa16.04■□□□□ 0.16
SEMA4B-215ENST00000560089 PIGBOS1A0A0B4J2F0 54 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 PSMB11A5LHX3 300 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 RHBDL1O75783 438 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 IGLV3-1P01715 115 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 RAB31Q13636 194 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 RSPO4Q2I0M5 234 aaPredicted RBP16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 COPS7AQ9UBW8 275 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 H3BRM9 83 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms