RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 SNRPGP15A8MWD9 76 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 TCF21O43680 179 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 OR2A4O95047 310 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 NDUFA3O95167 84 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 SPDEFO95238 335 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 IGKV1-5P01602 117 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 HOXB5P09067 269 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 NF1P21359 2839 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 UBE2KP61086 200 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 C5orf64Q2M2E5 130 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 C16orf82Q7Z2V1 217 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 PUSL1Q8N0Z8 303 aaKnown RBP7.65□□□□□ -1.18
CUX1-216ENST00000558469 FAM71E2Q8N5Q1 922 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 C5orf56Q8N8D9 126 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 LRTM2Q8N967 370 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 Q8N9W7 124 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 TEX45Q8NA69 505 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 OR8H1Q8NGG4 311 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 RRNAD1Q96FB5 475 aaKnown RBP7.65□□□□□ -1.18
CUX1-216ENST00000558469 OR2A7Q96R45 310 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 JMJD8Q96S16 334 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 RASL11BQ9BPW5 248 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 OR51J1Q9H342 316 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 RANBP3Q9H6Z4 567 aaPredicted RBP7.65□□□□□ -1.18
CUX1-216ENST00000558469 TPSG1Q9NRR2 321 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 TMEM140Q9NV12 185 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 SIGLEC9Q9Y336 463 aa7.65□□□□□ -1.18
CUX1-216ENST00000558469 TRAV3A0A0B4J244 114 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 A0A0B4J2A0 478 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 PIGBOS1A0A0B4J2F0 54 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 A0A0G2JRQ6 117 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 DUXBA0A1W2PPF3 345 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 C7orf66A4D0T2 115 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 SH2D7A6NKC9 451 aaPredicted RBP7.64□□□□□ -1.19
CUX1-216ENST00000558469 CLDN34H7C241 214 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 FCN1O00602 326 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 SSNA1O43805 119 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 GPR137BO60478 399 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 ADAP1O75689 374 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 KBTBD11O94819 623 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 CRYGBP07316 175 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 OR9G9P0C7N8 305 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 VDAC1P21796 283 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 UBA52P62987 128 aaKnown RBP7.64□□□□□ -1.19
CUX1-216ENST00000558469 PJVKQ0ZLH3 352 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 POU2AF1Q16633 256 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 IZUMO4Q1ZYL8 232 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 PPP1R27Q86WC6 154 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 VSTM2AQ8TAG5 236 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 ZNF430Q9H8G1 570 aaPredicted RBP7.64□□□□□ -1.19
CUX1-216ENST00000558469 RAB18Q9NP72 206 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 BET1LQ9NYM9 111 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 SHPKQ9UHJ6 478 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 NSG2Q9Y328 171 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 MMP24Q9Y5R2 645 aa7.64□□□□□ -1.19
CUX1-216ENST00000558469 C13orf42A0A1B0GVH6 325 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 FAM181BA6NEQ2 426 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 DBX1A6NMT0 343 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 M0QZK8 103 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 UPK2O00526 184 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 FGF16O43320 207 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 RBMXL2O75526 392 aaKnown RBP7.63□□□□□ -1.19
CUX1-216ENST00000558469 SNAPC5O75971 98 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 IFNA21P01568 189 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 AMY1AP04745 511 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 RNASE1P07998 156 aaKnown RBP7.63□□□□□ -1.19
CUX1-216ENST00000558469 IL6RP08887 468 aaPredicted RBP7.63□□□□□ -1.19
CUX1-216ENST00000558469 P0C879 139 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 GNB1P62873 340 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 BLCAPP62952 87 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 MRGPRG-AS1Q2M3A8 158 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 C2orf68Q2NKX9 166 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 C9orf152Q5JTZ5 239 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 GGNBP1Q5YKI7 109 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 Q6ZRM9 215 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 FAM219AQ8IW50 185 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 OR4A16Q8NH70 328 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 OR4A5Q8NH83 315 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 TMEM167AQ8TBQ9 72 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 LSM10Q969L4 123 aaKnown RBP7.63□□□□□ -1.19
CUX1-216ENST00000558469 GPR146Q96CH1 333 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 TMED3Q9Y3Q3 217 aa7.63□□□□□ -1.19
CUX1-216ENST00000558469 MPTX1A8MV57 137 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 FAM25EA8MYX2 175 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 TRIM77I1YAP6 450 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 CCSO14618 274 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 CNIH1O95406 144 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 CA2P00918 260 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 HLA-DRB1P01911 266 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 CRYBA1P05813 215 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 OR2B8PP59922 312 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 RPL8P62917 257 aaKnown RBP7.62□□□□□ -1.19
CUX1-216ENST00000558469 SRSF2Q01130 221 aaKnown RBP7.62□□□□□ -1.19
CUX1-216ENST00000558469 TNXAQ16473 311 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 PRSS8Q16651 343 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 NMSQ5H8A3 153 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 Q6ZNX1 250 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 MMD2Q8IY49 270 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 CADM3Q8N126 398 aa7.62□□□□□ -1.19
CUX1-216ENST00000558469 HSPB9Q9BQS6 159 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms