RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 H1FXQ92522 213 aaKnown RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 ZNF488Q96MN9 340 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 TMEM56Q96MV1 263 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 DCUN1D5Q9BTE7 237 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 ATG5Q9H1Y0 275 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 OR14J1Q9UGF5 321 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 RNF24Q9Y225 148 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 STRAPQ9Y3F4 350 aaKnown RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 NUBP2Q9Y5Y2 271 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 TMEM56-RWDD3S4R434 201 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 CADP27708 2225 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 ALPK2Q86TB3 2170 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 IGKV1-6A0A0C4DH72 117 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 LGALS9O00182 355 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 RRHO14718 337 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 LY6HO94772 140 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 IGLV2-23P01705 113 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 AKAIN1P0CW23 69 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 CT45A6P0DMU7 189 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 CT45A5P0DMU8 189 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 CT45A7P0DMV0 189 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 GDNFP39905 211 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 CDX1P47902 265 aaPredicted RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 VEGFCP49767 419 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 CMC4P56277 68 aaPredicted RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 SRSF4Q08170 494 aaKnown RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 HNRNPA0Q13151 305 aaKnown RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 C5orf64Q2M2E5 130 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 TRIM16LQ309B1 348 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 TMEM69Q5SWH9 247 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 FAM201AQ5SY85 155 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 OTPQ5XKR4 325 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 FAM90A2PQ658T7 463 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 GLDNQ6ZMI3 551 aaPredicted RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 Q6ZSV7 163 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 DRAM1Q8N682 238 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 STPG3Q8N7X2 389 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 ZFP41Q8N8Y5 198 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 BEST4Q8NFU0 473 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 OR5B3Q8NH48 314 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 SNAPC3Q92966 411 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 SSX3Q99909 188 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 MIXL1Q9H2W2 232 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 PRNDQ9UKY0 176 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 FOXA2Q9Y261 457 aaPredicted RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 TRBV9A0A0B4J1U6 114 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 A0A0G2JLM5 398 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 A0A1W2PN81 502 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 ZNF736B4DX44 427 aaPredicted RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 CORTO00230 105 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 IL5P05113 134 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 UCP1P25874 307 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 PPIFP30405 207 aaKnown RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 S100A7P31151 101 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 CHRNA7P36544 502 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 EDDM3BP56851 147 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 TAS2R30P59541 319 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 NEDD8Q15843 81 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 C2orf68Q2NKX9 166 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 BSXQ3C1V8 233 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 ATAD3CQ5T2N8 411 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 PRAMEF5Q5TYX0 476 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 TRAPPC6BQ86SZ2 158 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 OR10X1Q8NGY0 326 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 OCC1Q8TAD7 63 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 C4orf3Q8WVX3 66 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 RRNAD1Q96FB5 475 aaKnown RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 UBE2E2Q96LR5 201 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 NICN1Q9BSH3 213 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 SLC25A33Q9BSK2 321 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 FAAP24Q9BTP7 215 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 OR51J1Q9H342 316 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 ESM1Q9NQ30 184 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 OR2S2Q9NQN1 319 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 SERTAD4Q9NUC0 356 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 RDH8Q9NYR8 311 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 KIAA1456Q9P272 454 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 TSSC4Q9Y5U2 329 aaPredicted RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 DOCK11Q5JSL3 2073 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 HUWE1Q7Z6Z7 4374 aaKnown RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 TRAV25A0A0B4J276 109 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 A0A1B0GW55 424 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 C5orf52A6NGY3 159 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 PRAF2O60831 178 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 CFDP00746 253 aaPredicted RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 PPYP01298 95 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 IGLV2-14P01704 120 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 DUX4L2P0CJ85 424 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 DUX4L3P0CJ86 424 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 DUX4L4P0CJ87 422 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 DUX4L5P0CJ88 424 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 DUX4L6P0CJ89 424 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 DUX4L7P0CJ90 424 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 CCL3L1P16619 93 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 S100A5P33763 92 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 NUP62P37198 522 aaPredicted RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 KLF9Q13886 244 aaPredicted RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 CXorf66Q5JRM2 361 aaPredicted RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 IDNKQ5T6J7 187 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 FAM27D1Q5T7N8 215 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms