RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 LHX4Q969G2 390 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ZDHHC16Q969W1 377 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MARC2Q969Z3 335 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR4C12Q96R67 309 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TSNAXQ99598 290 aaKnown RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CLEC7AQ9BXN2 247 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 UNKLQ9H9P5 680 aaKnown RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 BET1LQ9NYM9 111 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PFDN2Q9UHV9 154 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ZNF257Q9Y2Q1 563 aa4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 STRAPQ9Y3F4 350 aaKnown RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ANKRD17O75179 2603 aaKnown RBP4.4□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CENPEQ02224 2701 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 UTP20O75691 2785 aaKnown RBP4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RAB19A4D1S5 217 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CEBPZOSA8MTT3 80 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ZNF705EA8MWA4 302 aaPredicted RBP4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 NUDT19A8MXV4 375 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 H3BP45 60 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TRIM77I1YAP6 450 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SHOXO15266 292 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RBMXL2O75526 392 aaKnown RBP4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SCAF4O95104 1147 aaKnown RBP4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IFNA17P01571 189 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IGLV2-23P01705 113 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IGHV4-39P01824 125 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 APOA2P02652 100 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PAX1P15863 534 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ZFP36P26651 326 aaKnown RBP4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ATP6V0CP27449 155 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 REG1BP48304 166 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 DLX1P56177 255 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR2B8PP59922 312 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HBG1P69891 147 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HBG2P69892 147 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 BLOC1S1P78537 153 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ATP6V1FQ16864 119 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MRGPRG-AS1Q2M3A8 158 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 VWC2Q2TAL6 325 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 LRRC75BQ2VPJ9 315 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PXDC1Q5TGL8 231 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HCP5Q6MZN7 132 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 BTNL8Q6UX41 500 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CENPVQ7Z7K6 275 aaPredicted RBP4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TGIF2LXQ8IUE1 241 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HSD17B11Q8NBQ5 300 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR4C13Q8NGP0 309 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR4A5Q8NH83 315 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 FLYWCH2Q96CP2 140 aaKnown RBP4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RBMXL1Q96E39 390 aaKnown RBP4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 GNPNAT1Q96EK6 184 aaPredicted RBP4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SH3BGRL3Q9H299 93 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HIPK2Q9H2X6 1198 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PARP11Q9NR21 331 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MMP26Q9NRE1 261 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 FKBP11Q9NYL4 201 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PRNDQ9UKY0 176 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TCF19Q9Y242 345 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 POLR3KQ9Y2Y1 108 aaPredicted RBP4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 WASHC3Q9Y3C0 194 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RFNGQ9Y644 331 aa4.39□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IGHV1-3A0A0C4DH29 117 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TEX50A0A1B0GTY4 177 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ODF3BA8MYP8 253 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 VWC2LB2RUY7 222 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 UMAD1C9J7I0 102 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PRSS46E5RG02 174 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 INS-IGF2F8WCM5 200 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 H7C2Y5 167 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ENSAO43768 121 aaKnown RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 KBTBD11O94819 623 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IFNA5P01569 189 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CRYGBP07316 175 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SAA1P0DJI8 122 aaPredicted RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 USF1P22415 310 aaPredicted RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 LGALS7P47929 136 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PDLIM4P50479 330 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RAB13P51153 203 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ATP5IP56385 69 aaPredicted RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RPS16P62249 146 aaKnown RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ARF6P62330 175 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RPP30P78346 268 aaKnown RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PRCDQ00LT1 54 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SLC38A11Q08AI6 406 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PJVKQ0ZLH3 352 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HABP2Q14520 560 aaPredicted RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SPINK9Q5DT21 86 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 LDLRAD2Q5SZI1 272 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 UQCC3Q6UW78 93 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 DPPA3Q6W0C5 159 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IL34Q6ZMJ4 242 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 THNSL2Q86YJ6 484 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PNKDQ8N490 385 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TEX45Q8NA69 505 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR10P1Q8NGE3 313 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR2G3Q8NGZ4 309 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR5B3Q8NH48 314 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CLDND2Q8NHS1 167 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TMEM167AQ8TBQ9 72 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms