RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 SPAG8Q99932 426 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 GINS4Q9BRT9 223 aa14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 OR51E2Q9H255 320 aa14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 C5orf66Q9H5L9 145 aa14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 MAP6D1Q9H9H5 199 aa14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 SLC2A9Q9NRM0 540 aa14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 KCNK7Q9Y2U2 307 aa14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 DYNC1H1Q14204 4646 aaKnown RBP14.96□□□□□ -0.01
SQSTM1-215ENST00000514093 XRCC3O43542 346 aa14.96□□□□□ -0.01
SQSTM1-215ENST00000514093 MYOD1P15172 320 aa14.96□□□□□ -0.01
SQSTM1-215ENST00000514093 PSMB6P28072 239 aa14.96□□□□□ -0.01
SQSTM1-215ENST00000514093 MRPS15P82914 257 aaKnown RBP14.96□□□□□ -0.01
SQSTM1-215ENST00000514093 PLA2G7Q13093 441 aa14.96□□□□□ -0.01
SQSTM1-215ENST00000514093 NANOGP1Q8N7R0 232 aa14.96□□□□□ -0.01
SQSTM1-215ENST00000514093 C2CD4CQ8TF44 421 aa14.96□□□□□ -0.01
SQSTM1-215ENST00000514093 DNAH17Q9UFH2 4485 aa14.96□□□□□ -0.02
SQSTM1-215ENST00000514093 RAB27BO00194 218 aa14.95□□□□□ -0.02
SQSTM1-215ENST00000514093 CRYGCP07315 174 aa14.95□□□□□ -0.02
SQSTM1-215ENST00000514093 RPA2P15927 270 aa14.95□□□□□ -0.02
SQSTM1-215ENST00000514093 GPR183P32249 361 aa14.95□□□□□ -0.02
SQSTM1-215ENST00000514093 AHSA2Q719I0 299 aa14.95□□□□□ -0.02
SQSTM1-215ENST00000514093 MS4A15Q8N5U1 240 aa14.95□□□□□ -0.02
SQSTM1-215ENST00000514093 OR56B1Q8NGI3 324 aa14.95□□□□□ -0.02
SQSTM1-215ENST00000514093 RARRES2Q99969 163 aa14.95□□□□□ -0.02
SQSTM1-215ENST00000514093 UFC1Q9Y3C8 167 aa14.95□□□□□ -0.02
SQSTM1-215ENST00000514093 AK6Q9Y3D8 172 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-215ENST00000514093 SLC17A2O00624 439 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 TSPAN4O14817 238 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 DEFB4AO15263 64 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 ZNF735P0CB33 412 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 DEFA4P12838 97 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 RPL30P62888 115 aaKnown RBP14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 MED22Q15528 200 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 ZNF124Q15973 351 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 LAIR2Q6ISS4 152 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 APRG1Q8IVJ8 170 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 H1FOOQ8IZA3 346 aaPredicted RBP14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 PQLC1Q8N2U9 271 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 GALNT14Q96FL9 552 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 OR2A7Q96R45 310 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 MFFQ9GZY8 342 aa14.94□□□□□ -0.02
SQSTM1-215ENST00000514093 TRBV7-1A0A0A6YYK4 115 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 A0A1B0GVY2 172 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 IGLL5B9A064 214 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 DHFRP00374 187 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 UCHL1P09936 223 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 MED14OSP0DP75 135 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 GALP22466 123 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 RAB11BQ15907 218 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 C2orf76Q3KRA6 126 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 KCTD9Q7L273 389 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 S100A14Q9HCY8 104 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 PSORS1C1Q9UIG5 152 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 APLNQ9ULZ1 77 aa14.93□□□□□ -0.02
SQSTM1-215ENST00000514093 IGLV11-55A0A075B6I3 123 aa14.92□□□□□ -0.02
SQSTM1-215ENST00000514093 A0A075B6Q4 140 aa14.92□□□□□ -0.02
SQSTM1-215ENST00000514093 DENRO43583 198 aaKnown RBP14.92□□□□□ -0.02
SQSTM1-215ENST00000514093 KBTBD11O94819 623 aa14.92□□□□□ -0.02
SQSTM1-215ENST00000514093 CDK1P06493 297 aa14.92□□□□□ -0.02
SQSTM1-215ENST00000514093 HIST1H1BP16401 226 aaKnown RBP14.92□□□□□ -0.02
SQSTM1-215ENST00000514093 CRHBPP24387 322 aa14.92□□□□□ -0.02
SQSTM1-215ENST00000514093 PSMD7P51665 324 aa14.92□□□□□ -0.02
SQSTM1-215ENST00000514093 ELLP55199 621 aaPredicted RBP14.92□□□□□ -0.02
SQSTM1-215ENST00000514093 PLET1Q6UQ28 207 aa14.92□□□□□ -0.02
SQSTM1-215ENST00000514093 DNAH11Q96DT5 4516 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 IGKV1D-8A0A087WSZ0 117 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 GNB3P16520 340 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 ARFRP1Q13795 201 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 KLK9Q2XQG4 91 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 LAMTOR1Q6IAA8 161 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 SSX9Q7RTT3 188 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 PUSL1Q8N0Z8 303 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 OR11H2Q8NH07 326 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 TMEM167AQ8TBQ9 72 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 ZNF502Q8TBZ5 544 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 CD300LFQ8TDQ1 290 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 TMEM203Q969S6 136 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 FAM3DQ96BQ1 224 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 RAB3CQ96E17 227 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 CXorf58Q96LI9 332 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 CSTL1Q9H114 145 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 KLK9Q9UKQ9 250 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 PRELID3BQ9Y3B1 194 aa14.91□□□□□ -0.02
SQSTM1-215ENST00000514093 MUC4Q99102 2169 aa14.9□□□□□ -0.02
SQSTM1-215ENST00000514093 DIRAS3O95661 229 aa14.9□□□□□ -0.02
SQSTM1-215ENST00000514093 LINC00336Q6ZUF6 198 aa14.9□□□□□ -0.02
SQSTM1-215ENST00000514093 ZNF645Q8N7E2 425 aa14.9□□□□□ -0.02
SQSTM1-215ENST00000514093 BPIFB6Q8NFQ5 453 aa14.9□□□□□ -0.02
SQSTM1-215ENST00000514093 KRTAP4-5Q9BYR2 181 aa14.9□□□□□ -0.02
SQSTM1-215ENST00000514093 ZNF436Q9C0F3 470 aaPredicted RBP14.9□□□□□ -0.02
SQSTM1-215ENST00000514093 MRPS7Q9Y2R9 242 aaKnown RBP14.9□□□□□ -0.02
SQSTM1-215ENST00000514093 IGHV3OR16-8A0A075B7F1 116 aa14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 TMEM272A0A1B0GTI8 110 aa14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 OR4C46A6NHA9 309 aa14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 CGB1A6NKQ9 187 aa14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 MPTX1A8MV57 137 aa14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 MAS1LP35410 378 aa14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 MFAP2P55001 183 aa14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 TCTAP57738 103 aa14.89□□□□□ -0.03
SQSTM1-215ENST00000514093 GVQW1Q8N7I0 195 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms