RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	SPDEF	O95238	335 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	CDS2	O95674	445 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	IGHG2	P01859	326 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	HLA-DRB1	P01911	266 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	H2AFB2	P0C5Z0	115 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	OR4E1	P0C645	316 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	MECP2	P51608	486 aa	Known RBP	11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	ASPHD1	Q5U4P2	390 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	C11orf87	Q6NUJ2	197 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	TMEM167A	Q8TBQ9	72 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	WIPF2	Q8TF74	440 aa	Predicted RBP	11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	CASTOR1	Q8WTX7	329 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	TMEM56	Q96MV1	263 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	SCGB3A2	Q96PL1	93 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	RASL11B	Q9BPW5	248 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	NPFFR1	Q9GZQ6	430 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	RAB18	Q9NP72	206 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	COMMD9	Q9P000	198 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	TMEM56-RWDD3	S4R434	201 aa		11.46	□□□□□ -0.57
MATR3-238	ENST00000512107	MARCH11	A6NNE9	402 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107		G3V318	75 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	ATP6V0E1	O15342	81 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	KBTBD11	O94819	623 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	OR2A4	O95047	310 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	NQO2	P16083	231 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	DHRS2	Q13268	280 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	VMA21	Q3ZAQ7	101 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	TMEM128	Q5BJH2	165 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	C19orf54	Q5BKX5	351 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	C19orf35	Q6ZS72	473 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	LYZL2	Q7Z4W2	148 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	PPP1R27	Q86WC6	154 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	SGPP2	Q8IWX5	399 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	TCTEX1D1	Q8N7M0	179 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	CD300LF	Q8TDQ1	290 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	GPR146	Q96CH1	333 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	OR2A7	Q96R45	310 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	PRSS22	Q9GZN4	317 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	KIAA1456	Q9P272	454 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	NUBP2	Q9Y5Y2	271 aa		11.45	□□□□□ -0.58
MATR3-238	ENST00000512107	HRAS	P01112	189 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	OPN1MW	P04001	364 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	CRYBA1	P05813	215 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	SERPINE2	P07093	398 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	OPN1MW2	P0DN77	364 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	OPN1MW3	P0DN78	364 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	VAMP1	P23763	118 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	PROK1	P58294	105 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	OR2B8P	P59922	312 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	RPL15	P61313	204 aa	Known RBP	11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	GNB1	P62873	340 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	CBX3	Q13185	183 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	DCTN2	Q13561	401 aa	Known RBP	11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	C2orf68	Q2NKX9	166 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	TRIM16L	Q309B1	348 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	TMEM268	Q5VZI3	342 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	LYG2	Q86SG7	212 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	SLC35G3	Q8N808	338 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	ENKUR	Q8TC29	256 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	WNT10A	Q9GZT5	417 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	OR51J1	Q9H342	316 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	BET1L	Q9NYM9	111 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	WSB1	Q9Y6I7	421 aa		11.44	□□□□□ -0.58
MATR3-238	ENST00000512107	TENM1	Q9UKZ4	2725 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107		M0QZK8	103 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	APELA	P0DMC3	54 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	S100G	P29377	79 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	CFHR3	Q02985	330 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	FXYD3	Q14802	87 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	PLGLA	Q15195	96 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	AWAT1	Q58HT5	328 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	SLC35E3	Q7Z769	313 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	DMBX1	Q8NFW5	382 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	MARVELD1	Q9BSK0	173 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	ALX4	Q9H161	411 aa	Predicted RBP	11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	PALMD	Q9NP74	551 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	PARP11	Q9NR21	331 aa		11.43	□□□□□ -0.58
MATR3-238	ENST00000512107	CLPSL1	A2RUU4	121 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	HMX3	A6NHT5	357 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	MPTX1	A8MV57	137 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	TEX22	C9J3V5	150 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	SOX15	O60248	233 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	ADAP1	O75689	374 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	HLA-A	P01891	365 aa	Known RBP	11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	VDAC2	P45880	294 aa	Predicted RBP	11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	DEFA1	P59665	94 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	DEFA3	P59666	94 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	TNXA	Q16473	311 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	NMS	Q5H8A3	153 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	TCTEX1D4	Q5JR98	221 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	ZNF562	Q6V9R5	426 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	FAM219A	Q8IW50	185 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	GRPEL2	Q8TAA5	225 aa		11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	RBPMS	Q93062	196 aa	Known RBP	11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	QTRT1	Q9BXR0	403 aa	Known RBP	11.42	□□□□□ -0.58
MATR3-238	ENST00000512107	TEX50	A0A1B0GTY4	177 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	INMT-MINDY4	F8WBC2	141 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	HLA-G	P17693	338 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms