RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.71□□□□□ -1.5
USP39-219ENST00000496047 OR8B3Q8NGG8 313 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 OR10X1Q8NGY0 326 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 NEU4Q8WWR8 484 aaPredicted RBP5.71□□□□□ -1.5
USP39-219ENST00000496047 RAB1CQ92928 201 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 TNFRSF14Q92956 283 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 TMEM186Q96B77 213 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 NEIL1Q96FI4 390 aaPredicted RBP5.71□□□□□ -1.5
USP39-219ENST00000496047 OR8B2Q96RD0 313 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 SH3BGRL3Q9H299 93 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 PRORYQ9H606 182 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 LINC00574Q9H8X3 128 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 WFDC1Q9HC57 220 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 HEYLQ9NQ87 328 aaPredicted RBP5.71□□□□□ -1.5
USP39-219ENST00000496047 TMEM140Q9NV12 185 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 KIAA1456Q9P272 454 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 PRNDQ9UKY0 176 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 CARHSP1Q9Y2V2 147 aaKnown RBP5.71□□□□□ -1.5
USP39-219ENST00000496047 A0A1B0GW64 132 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 C15orf61A6NNL5 157 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 DVL1O14640 695 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 AGPAT2O15120 278 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 TSPAN9O75954 239 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 IFNA10P01566 189 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 SFTA3P0C7M3 94 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 P0C879 139 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 SELLP14151 372 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 AGAP20933 346 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 FGF7P21781 194 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 PPT1P50897 306 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 PRRX1P54821 245 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 PAX9P55771 341 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 ATP5IP56385 69 aaPredicted RBP5.7□□□□□ -1.5
USP39-219ENST00000496047 ADORA2A-AS1P86434 159 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 HOXA4Q00056 320 aaPredicted RBP5.7□□□□□ -1.5
USP39-219ENST00000496047 RAB31Q13636 194 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 LRRC75BQ2VPJ9 315 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 ACOT6Q3I5F7 207 aaPredicted RBP5.7□□□□□ -1.5
USP39-219ENST00000496047 RPL39P5Q59GN2 51 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 TMEM41BQ5BJD5 291 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 C22orf34Q6ZV56 151 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 SSX9Q7RTT3 188 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 ZNF429Q86V71 674 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 PDPNQ86YL7 162 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 PUSL1Q8N0Z8 303 aaKnown RBP5.7□□□□□ -1.5
USP39-219ENST00000496047 LINC00311Q8N616 119 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 OR4A5Q8NH83 315 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 LYPD6BQ8NI32 183 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 OSR1Q8TAX0 266 aaPredicted RBP5.7□□□□□ -1.5
USP39-219ENST00000496047 LINC01560Q8TB33 94 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 BSCL2Q96G97 398 aaPredicted RBP5.7□□□□□ -1.5
USP39-219ENST00000496047 C5orf30Q96GV9 206 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 ZNF251Q9BRH9 671 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 GGACTQ9BVM4 153 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 WDR61Q9GZS3 305 aaKnown RBP5.7□□□□□ -1.5
USP39-219ENST00000496047 PLEKHA3Q9HB20 300 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 CBLN4Q9NTU7 201 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 MIOXQ9UGB7 285 aa5.7□□□□□ -1.5
USP39-219ENST00000496047 TMA7Q9Y2S6 64 aaKnown RBP5.7□□□□□ -1.5
USP39-219ENST00000496047 MALRD1Q5VYJ5 2156 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 A0A1W2PN81 502 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 MEX3AA1L020 520 aaKnown RBP5.69□□□□□ -1.5
USP39-219ENST00000496047 SMCO3A2RU48 225 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 KIAA1324LA8MWY0 1029 aaPredicted RBP5.69□□□□□ -1.5
USP39-219ENST00000496047 H7C2Y5 167 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 GOSR1O95249 250 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 RBP4P02753 201 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 MC5RP33032 325 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 CHRNA7P36544 502 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 DLK1P80370 383 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 POU2AF1Q16633 256 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 IZUMO4Q1ZYL8 232 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 MST1LQ2TV78 715 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 VMA21Q3ZAQ7 101 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 CT45A1Q5HYN5 189 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 Q6ZRM9 215 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 ZNF439Q8NDP4 499 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 OR13D1Q8NGV5 346 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 OR9G1Q8NH87 305 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 CT45A3Q8NHU0 189 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 DDB2Q92466 427 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 TAF15Q92804 592 aaKnown RBP eCLIP5.69□□□□□ -1.5
USP39-219ENST00000496047 PCGF1Q9BSM1 259 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 SSBP4Q9BWG4 385 aaPredicted RBP5.69□□□□□ -1.5
USP39-219ENST00000496047 TMEM231Q9H6L2 316 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 FOXA2Q9Y261 457 aaPredicted RBP5.69□□□□□ -1.5
USP39-219ENST00000496047 ZNF257Q9Y2Q1 563 aa5.69□□□□□ -1.5
USP39-219ENST00000496047 PKDREJQ9NTG1 2253 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 CTXND1A0A1B0GTU2 59 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 RBFOX3A6NFN3 312 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 SLC31A2O15432 143 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 CYB5BO43169 146 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 PPIHO43447 177 aaKnown RBP5.68□□□□□ -1.5
USP39-219ENST00000496047 TMEM50AO95807 157 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 MT-CO2P00403 227 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 IGHV3-7P01780 117 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 IFNA4P05014 189 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 CD5P06127 495 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 OR9G9P0C7N8 305 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms