RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 PARD6GQ9BYG4 376 aaPredicted RBP12.78□□□□□ -0.36
SHISA5-216ENST00000494854 EIF5A2Q9GZV4 153 aaKnown RBP12.78□□□□□ -0.36
SHISA5-216ENST00000494854 GAL3ST2Q9H3Q3 398 aa12.78□□□□□ -0.36
SHISA5-216ENST00000494854 CISD1Q9NZ45 108 aaKnown RBP12.78□□□□□ -0.36
SHISA5-216ENST00000494854 SETD2Q9BYW2 2564 aaPredicted RBP12.77□□□□□ -0.36
SHISA5-216ENST00000494854 CEBPZOSA8MTT3 80 aa12.77□□□□□ -0.37
SHISA5-216ENST00000494854 DNASE2O00115 360 aaPredicted RBP12.77□□□□□ -0.37
SHISA5-216ENST00000494854 TNFRSF13BO14836 293 aaPredicted RBP12.77□□□□□ -0.37
SHISA5-216ENST00000494854 GPR37O15354 613 aa12.77□□□□□ -0.37
SHISA5-216ENST00000494854 FCN3O75636 299 aa12.77□□□□□ -0.37
SHISA5-216ENST00000494854 F12P00748 615 aaPredicted RBP12.77□□□□□ -0.37
SHISA5-216ENST00000494854 H2AFB1P0C5Y9 115 aa12.77□□□□□ -0.37
SHISA5-216ENST00000494854 OR8U8P0C7N1 319 aa12.77□□□□□ -0.37
SHISA5-216ENST00000494854 OR2B8PP59922 312 aa12.77□□□□□ -0.37
SHISA5-216ENST00000494854 AARDQ4LEZ3 155 aa12.77□□□□□ -0.37
SHISA5-216ENST00000494854 SLC25A48Q6ZT89 311 aaKnown RBP12.77□□□□□ -0.37
SHISA5-216ENST00000494854 OR10A7Q8NGE5 316 aa12.77□□□□□ -0.37
SHISA5-216ENST00000494854 OR4A16Q8NH70 328 aa12.77□□□□□ -0.37
SHISA5-216ENST00000494854 PSMG3Q9BT73 122 aaPredicted RBP12.77□□□□□ -0.37
SHISA5-216ENST00000494854 PBDC1Q9BVG4 233 aa12.77□□□□□ -0.37
SHISA5-216ENST00000494854 WDR61Q9GZS3 305 aaKnown RBP12.77□□□□□ -0.37
SHISA5-216ENST00000494854 PMS2P5A8MQ11 134 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 NUPL2O15504 423 aaKnown RBP12.76□□□□□ -0.37
SHISA5-216ENST00000494854 SNAPINO95295 136 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 PPT1P50897 306 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 ZNF672Q499Z4 452 aaPredicted RBP12.76□□□□□ -0.37
SHISA5-216ENST00000494854 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 SPSB3Q6PJ21 355 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 LYPD2Q6UXB3 125 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 VKORC1L1Q8N0U8 176 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 ADTRPQ96IZ2 230 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 VPS13CQ709C8 3753 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 IGHV1-69-2A0A0G2JMI3 117 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 UBE2L5PA0A1B0GUS4 154 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 BTBD17A6NE02 478 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 TSPAN4O14817 238 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 NDUFB3O43676 98 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 IFNA17P01571 189 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 LRRC10Q5BKY1 277 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 WFDC11Q8NEX6 87 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 ZNF714Q96N38 554 aa12.76□□□□□ -0.37
SHISA5-216ENST00000494854 A0A1B0GW64 132 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 FAM74A7A6NL05 159 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 DAOP14920 347 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 CCL3L1P16619 93 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 ERVFRD-1P60508 538 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 ATP6V1FQ16864 119 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 FAM74A3Q4VXF1 159 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 TMEM200BQ69YZ2 307 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 ZNF383Q8NA42 475 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 OR10P1Q8NGE3 313 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 TAF15Q92804 592 aaKnown RBP eCLIP12.75□□□□□ -0.37
SHISA5-216ENST00000494854 HIPK2Q9H2X6 1198 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 TMEM140Q9NV12 185 aa12.75□□□□□ -0.37
SHISA5-216ENST00000494854 C2CD3Q4AC94 2353 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 SPCS3P61009 180 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 CCL20P78556 96 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 SERF2P84101 59 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 RELBQ01201 579 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 HEPN1Q6WQI6 88 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 MUC15Q8N387 334 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 OR52E5Q8NH55 327 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 H1FXQ92522 213 aaKnown RBP12.74□□□□□ -0.37
SHISA5-216ENST00000494854 PINX1Q96BK5 328 aaKnown RBP12.74□□□□□ -0.37
SHISA5-216ENST00000494854 KAAG1Q9UBP8 84 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 CTSZQ9UBR2 303 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 KPTNQ9Y664 436 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 OVOL3O00110 214 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 LY86O95711 162 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 NPBWR1P48145 328 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 SFT2D1Q8WV19 159 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 TMEM147Q9BVK8 224 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 KIAA1456Q9P272 454 aa12.74□□□□□ -0.37
SHISA5-216ENST00000494854 TRAV3A0A0B4J244 114 aa12.73□□□□□ -0.37
SHISA5-216ENST00000494854 DVL1O14640 695 aa12.73□□□□□ -0.37
SHISA5-216ENST00000494854 HBE1P02100 147 aa12.73□□□□□ -0.37
SHISA5-216ENST00000494854 RAB2AP61019 212 aa12.73□□□□□ -0.37
SHISA5-216ENST00000494854 HFEQ30201 348 aa12.73□□□□□ -0.37
SHISA5-216ENST00000494854 PDLIM3Q53GG5 364 aaPredicted RBP12.73□□□□□ -0.37
SHISA5-216ENST00000494854 Q5PR19 223 aa12.73□□□□□ -0.37
SHISA5-216ENST00000494854 VSIRQ9H7M9 311 aa12.73□□□□□ -0.37
SHISA5-216ENST00000494854 RPRMQ9NS64 109 aa12.73□□□□□ -0.37
SHISA5-216ENST00000494854 ZNRD1Q9P1U0 126 aa12.73□□□□□ -0.37
SHISA5-216ENST00000494854 NDUFA2O43678 99 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 RPS16P62249 146 aaKnown RBP12.72□□□□□ -0.37
SHISA5-216ENST00000494854 GNB2P62879 340 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 TAGLNQ01995 201 aaKnown RBP12.72□□□□□ -0.37
SHISA5-216ENST00000494854 ZNF429Q86V71 674 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 PERPQ96FX8 193 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 RHOVQ96L33 236 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 CLCC1Q96S66 551 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 TIMM9Q9Y5J7 89 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 RBFOX3A6NFN3 312 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 C15orf62A8K5M9 175 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 SCAF4O95104 1147 aaKnown RBP12.72□□□□□ -0.37
SHISA5-216ENST00000494854 ARG1P05089 322 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 SOD3P08294 240 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 CT45A6P0DMU7 189 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 CT45A5P0DMU8 189 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms