RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 AK3Q9UIJ7 227 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 VPS13BQ7Z7G8 4022 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 FAT1Q14517 4588 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 IGHV3-49A0A0A0MS15 119 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 TRBV6-6A0A0A6YYG2 114 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 TRBV5-5A0A0J9YX44 114 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 TCRBV3S1A0A5B6 114 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 OR2T8A6NH00 312 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 ZNF735P0CB33 412 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 C4BPBP20851 252 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 NPY1RP25929 384 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 TPBGQ13641 420 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 OR2G6Q5TZ20 316 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 RPL22L1Q6P5R6 122 aaKnown RBP9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 TRUB1Q8WWH5 349 aaKnown RBP9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 GABARAPL1Q9H0R8 117 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 Q9N2K0 584 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 SMPXQ9UHP9 88 aa9.75□□□□□ -0.85
EXOSC3-207ENST00000490516 NBDYA0A0U1RRE5 68 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 F8W735 103 aaPredicted RBP9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 DUTP33316 252 aaKnown RBP9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 PSMD7P51665 324 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 DEFB131AP59861 70 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 LIPKQ5VXJ0 399 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 MEDAGQ5VYS4 303 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 STHQ8IWL8 128 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 GIMAP1Q8WWP7 306 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 FRZBQ92765 325 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 OR2A7Q96R45 310 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 DCUN1D5Q9BTE7 237 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 OR51E2Q9H255 320 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 KCNK15Q9H427 330 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 PLEKHJ1Q9NW61 149 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 TBC1D24Q9ULP9 559 aa9.74□□□□□ -0.85
EXOSC3-207ENST00000490516 K7EMT4 169 aa9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 NDUFA4O00483 81 aa9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 CHEK1O14757 476 aa9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 PTBP1P26599 531 aaKnown RBP eCLIP9.73□□□□□ -0.855e-6■■□□□ 13.8
EXOSC3-207ENST00000490516 FLOT2Q14254 428 aa9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 CCDC58Q4VC31 144 aa9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 MORN3Q6PF18 240 aaPredicted RBP9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 CDH26Q8IXH8 852 aa9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 RHPN1-AS1Q9BWJ2 59 aa9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 RIMS4Q9H426 269 aaPredicted RBP9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 RNF167Q9H6Y7 350 aa9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 AMBNQ9NP70 447 aa9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 MDFICQ9P1T7 246 aa9.73□□□□□ -0.85
EXOSC3-207ENST00000490516 A0A0A6YYD4 124 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 RAB27BO00194 218 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 BET1O15155 118 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 KBTBD11O94819 623 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 LIMS3P0CW19 117 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 LIMS4P0CW20 117 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 XGP55808 180 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 RPS11P62280 158 aaKnown RBP eCLIP9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 IRF3Q14653 427 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 Q499Y3 187 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 FAM90A2PQ658T7 463 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 FAM24BQ8N5W8 94 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 CSNK1G2-AS1Q8NCQ2 148 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 ADTRPQ96IZ2 230 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 FAM210BQ96KR6 192 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 TMEM59Q9BXS4 323 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 YTHDF1Q9BYJ9 559 aaKnown RBP9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 TMEM14BQ9NUH8 114 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 MGAT4AQ9UM21 535 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
EXOSC3-207ENST00000490516 IGHV3OR16-13A0A075B7E8 117 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 TRBV5-7A0A0A0MS05 114 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 IGHV3-74A0A0B4J1X5 117 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 IGHV7-4-1A0A0J9YVY3 117 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 CGB1A6NKQ9 187 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 FCGR3BO75015 233 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 DCTN3O75935 186 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 SRMP19623 302 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 ATP6AP1Q15904 470 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 TMEM41BQ5BJD5 291 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 IGSF11Q5DX21 431 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 OR2B11Q5JQS5 317 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 TRPT1Q86TN4 253 aaKnown RBP9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 TMEM116Q8NCL8 245 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 OR52I1Q8NGK6 324 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 GGHQ92820 318 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 SMIM19Q96E16 107 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 GHRLQ9UBU3 117 aa9.71□□□□□ -0.86
EXOSC3-207ENST00000490516 SNTNA6NMZ2 147 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 C15orf62A8K5M9 175 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 TRDCB7Z8K6 153 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 OGG1O15527 345 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 UNC119Q13432 240 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 AMIGO2Q86SJ2 522 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 TMEM167AQ8TBQ9 72 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 BSCL2Q96G97 398 aaPredicted RBP9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 CMTM3Q96MX0 182 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 UQCC2Q9BRT2 126 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 TM2D1Q9BX74 207 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 TMED3Q9Y3Q3 217 aa9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 RBM7Q9Y580 266 aaKnown RBP9.7□□□□□ -0.86
EXOSC3-207ENST00000490516 IGHV3-21A0A0B4J1V1 117 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 SOCS1O15524 211 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms