RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	GIMAP1	Q8WWP7	306 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	SLC25A46	Q96AG3	418 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	S100A16	Q96FQ6	103 aa	Known RBP	11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	WWC2-AS2	Q96NR7	200 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	ELOVL1	Q9BW60	279 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	SLC5A7	Q9GZV3	580 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	VCX3A	Q9NNX9	186 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	CGB1	A6NKQ9	187 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	BMPR1B	O00238	502 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	SULT1C2	O00338	296 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	ACTL6B	O94805	426 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	EIF4E	P06730	217 aa	Known RBP	11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	ZNF735	P0CB33	412 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	MYOD1	P15172	320 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	NAT1	P18440	290 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	KIR2DS2	P43631	304 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	FXYD4	P59646	89 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	EXOSC2	Q13868	293 aa	Known RBP	11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	TMEM69	Q5SWH9	247 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	SSX9	Q7RTT3	188 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	SPAG16	Q8N0X2	631 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	ZBTB34	Q8NCN2	500 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	VSTM2A	Q8TAG5	236 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	RSRP1	Q9BUV0	290 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	FUNDC2	Q9BWH2	189 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	DMRT1	Q9Y5R6	373 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596		U3KQK5	164 aa		11.46	□□□□□ -0.57
CCNL1-222	ENST00000479596	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	NPIPB5	A8MRT5	1133 aa		11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.45	□□□□□ -0.58	3e-12	■■□□□ 13
CCNL1-222	ENST00000479596	GNRHR	P30968	328 aa		11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	RPL27A	P46776	148 aa	Known RBP	11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	OR4A47	Q6IF82	309 aa		11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	TMEM17	Q86X19	198 aa		11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	NECAP1	Q8NC96	275 aa		11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	IFT46	Q9NQC8	304 aa		11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	BET1L	Q9NYM9	111 aa		11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	EHF	Q9NZC4	300 aa		11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	ZNF257	Q9Y2Q1	563 aa		11.45	□□□□□ -0.58
CCNL1-222	ENST00000479596	TRAV3	A0A0B4J244	114 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	OR2J3	O76001	311 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	HRAS	P01112	189 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	CRYGC	P07315	174 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	CSN3	P07498	182 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	FRMD6-AS1	P0C7T7	363 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	AREG	P15514	252 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	MAS1L	P35410	378 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	RFX2	P48378	723 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	VBP1	P61758	197 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	RPL8	P62917	257 aa	Known RBP	11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	ATP5G2	Q06055	141 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	POU2AF1	Q16633	256 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	KLK9	Q2XQG4	91 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	C15orf32	Q32M92	178 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	DHRS11	Q6UWP2	260 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	ANKRD13B	Q86YJ7	626 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	SBSPON	Q8IVN8	264 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596		Q8N1Y9	231 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	KCTD12	Q96CX2	325 aa	Known RBP	11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	FANCD2OS	Q96PS1	177 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	FYTTD1	Q96QD9	318 aa	Known RBP	11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	SLC2A9	Q9NRM0	540 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	KLK9	Q9UKQ9	250 aa		11.44	□□□□□ -0.58
CCNL1-222	ENST00000479596	PMP2	P02689	132 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	SMIM18	P0DKX4	95 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	HLA-G	P17693	338 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	TAS2R31	P59538	309 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	CATR1	Q13166	79 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	RPEL1	Q2QD12	228 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	ADAMTSL5	Q6ZMM2	481 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	SLC25A42	Q86VD7	318 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	LYSMD2	Q8IV50	215 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	OR51H1	Q8NH63	302 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	OR4A5	Q8NH83	315 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	MOB3A	Q96BX8	217 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	THAP7	Q9BT49	309 aa	Predicted RBP	11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	FXYD6	Q9H0Q3	95 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	SIGLEC8	Q9NYZ4	499 aa		11.43	□□□□□ -0.58
CCNL1-222	ENST00000479596	PPP5D1	E7EU14	171 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	S1PR2	O95136	353 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	HPRT1	P00492	218 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	CTRB1	P17538	263 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	PSMB6	P28072	239 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	PRSS3	P35030	304 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	MECP2	P51608	486 aa	Known RBP	11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	OR2B8P	P59922	312 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	HERV-K104	P61576	105 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	CTRB2	Q6GPI1	263 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	GPX8	Q8TED1	209 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	CCDC140	Q96MF4	163 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	NAA50	Q9GZZ1	169 aa	Known RBP	11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	COMMD3	Q9UBI1	195 aa		11.42	□□□□□ -0.58
CCNL1-222	ENST00000479596	UPK2	O00526	184 aa		11.41	□□□□□ -0.58
CCNL1-222	ENST00000479596	PGLYRP1	O75594	196 aa	Predicted RBP	11.41	□□□□□ -0.58
CCNL1-222	ENST00000479596	NDUFB8	O95169	186 aa		11.41	□□□□□ -0.58
CCNL1-222	ENST00000479596	APOA1	P02647	267 aa		11.41	□□□□□ -0.58
CCNL1-222	ENST00000479596	RLN1	P04808	185 aa		11.41	□□□□□ -0.58
CCNL1-222	ENST00000479596	REG1A	P05451	166 aa		11.41	□□□□□ -0.58
CCNL1-222	ENST00000479596	NQO2	P16083	231 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms