RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 C5orf66Q9H5L9 145 aa11.44□□□□□ -0.58
USP11-207ENST00000478596 NAA60Q9H7X0 242 aa11.44□□□□□ -0.58
USP11-207ENST00000478596 KIAA1456Q9P272 454 aa11.44□□□□□ -0.58
USP11-207ENST00000478596 TSSC4Q9Y5U2 329 aaPredicted RBP11.44□□□□□ -0.58
USP11-207ENST00000478596 NUBP2Q9Y5Y2 271 aa11.44□□□□□ -0.58
USP11-207ENST00000478596 NCBP2LA6PVI3 153 aaKnown RBP11.43□□□□□ -0.58
USP11-207ENST00000478596 VGLL3A8MV65 326 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 MPPED1O15442 326 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 RAMP3O60896 148 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 IGLV2-14P01704 120 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 H2AFB2P0C5Z0 115 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 LINC00205P59089 165 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 RPL30P62888 115 aaKnown RBP11.43□□□□□ -0.58
USP11-207ENST00000478596 ARSJQ5FYB0 599 aaPredicted RBP11.43□□□□□ -0.58
USP11-207ENST00000478596 ZFAND6Q6FIF0 208 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 ADAMTSL5Q6ZMM2 481 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 NRARPQ7Z6K4 114 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 ADAD2Q8NCV1 583 aaKnown RBP11.43□□□□□ -0.58
USP11-207ENST00000478596 CD300LFQ8TDQ1 290 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 FLYWCH2Q96CP2 140 aaKnown RBP11.43□□□□□ -0.58
USP11-207ENST00000478596 PRSS22Q9GZN4 317 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 GPR132Q9UNW8 380 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 FLVCR2Q9UPI3 526 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 TCF19Q9Y242 345 aa11.43□□□□□ -0.58
USP11-207ENST00000478596 C3orf85A0A1B0GTC6 90 aa11.42□□□□□ -0.58
USP11-207ENST00000478596 CRYM-AS1A6NIL9 109 aa11.42□□□□□ -0.58
USP11-207ENST00000478596 H0Y980 276 aa11.42□□□□□ -0.58
USP11-207ENST00000478596 HLA-AP01891 365 aaKnown RBP11.42□□□□□ -0.58
USP11-207ENST00000478596 F2RP25116 425 aa11.42□□□□□ -0.58
USP11-207ENST00000478596 DYNLT3P51808 116 aa11.42□□□□□ -0.58
USP11-207ENST00000478596 OR5AN1Q8NGI8 311 aa11.42□□□□□ -0.58
USP11-207ENST00000478596 CASTOR1Q8WTX7 329 aa11.42□□□□□ -0.58
USP11-207ENST00000478596 RBMXL1Q96E39 390 aaKnown RBP11.42□□□□□ -0.58
USP11-207ENST00000478596 TSNAXQ99598 290 aaKnown RBP11.42□□□□□ -0.58
USP11-207ENST00000478596 RTBDNQ9BSG5 229 aaPredicted RBP11.42□□□□□ -0.58
USP11-207ENST00000478596 SLC25A33Q9BSK2 321 aa11.42□□□□□ -0.58
USP11-207ENST00000478596 KCNIP3Q9Y2W7 256 aa11.42□□□□□ -0.58
USP11-207ENST00000478596 FRAS1Q86XX4 4008 aa11.41□□□□□ -0.58
USP11-207ENST00000478596 TCRBV4S1A1TA0A5B7 111 aa11.41□□□□□ -0.58
USP11-207ENST00000478596 OR5AC1P0C628 307 aa11.41□□□□□ -0.58
USP11-207ENST00000478596 ANXA7P20073 488 aaKnown RBP11.41□□□□□ -0.58
USP11-207ENST00000478596 AKR1C2P52895 323 aa11.41□□□□□ -0.58
USP11-207ENST00000478596 VMA21Q3ZAQ7 101 aa11.41□□□□□ -0.58
USP11-207ENST00000478596 MRPL41Q8IXM3 137 aaKnown RBP11.41□□□□□ -0.58
USP11-207ENST00000478596 TCTEX1D1Q8N7M0 179 aa11.41□□□□□ -0.58
USP11-207ENST00000478596 DMBX1Q8NFW5 382 aa11.41□□□□□ -0.58
USP11-207ENST00000478596 EAF1Q96JC9 268 aaPredicted RBP11.41□□□□□ -0.58
USP11-207ENST00000478596 MOB4Q9Y3A3 225 aa11.41□□□□□ -0.58
USP11-207ENST00000478596 NBR2O15453 112 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 PROP1O75360 226 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 B3GALNT1O75752 331 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 ATG12O94817 140 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 S1PR2O95136 353 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 HRASP01112 189 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 IGKV1-16P04430 117 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 LPAR6P43657 344 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 VDAC2P45880 294 aaPredicted RBP11.4□□□□□ -0.58
USP11-207ENST00000478596 UBE2MP61081 183 aaKnown RBP11.4□□□□□ -0.58
USP11-207ENST00000478596 SRPXP78539 464 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 EIF4EBP1Q13541 118 aaPredicted RBP11.4□□□□□ -0.58
USP11-207ENST00000478596 SP6Q3SY56 376 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 TMEM128Q5BJH2 165 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 SSX9Q7RTT3 188 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 OSR1Q8TAX0 266 aaPredicted RBP11.4□□□□□ -0.58
USP11-207ENST00000478596 DDB2Q92466 427 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 CITED4Q96RK1 184 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 TP53RKQ96S44 253 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 COMMD9Q9P000 198 aa11.4□□□□□ -0.58
USP11-207ENST00000478596 RBFOX2O43251 390 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP11-207ENST00000478596 SLC25A17O43808 307 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 OR2F2O95006 317 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 HPRT1P00492 218 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 RPA2P15927 270 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 DHODHQ02127 395 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 PPP1R1AQ13522 171 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 C9orf152Q5JTZ5 239 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 SLC25A42Q86VD7 318 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 THNSL2Q86YJ6 484 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 ZNF695Q8IW36 515 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 TMEM230Q96A57 120 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 RASL11BQ9BPW5 248 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 AIFM2Q9BRQ8 373 aa11.39□□□□□ -0.59
USP11-207ENST00000478596 GPN1Q9HCN4 374 aaPredicted RBP11.39□□□□□ -0.59
USP11-207ENST00000478596 A6NDX4 124 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 INMT-MINDY4F8WBC2 141 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 M0QZK8 103 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 JTBO76095 146 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 SPDEFO95238 335 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 DHFRP00374 187 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 OR4E1P0C645 316 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 NQO2P16083 231 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 SPNP16150 400 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 TMEM95Q3KNT9 176 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 TMEM268Q5VZI3 342 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 ETV3LQ6ZN32 361 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 Q6ZS46 218 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 C16orf82Q7Z2V1 217 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 OR8H1Q8NGG4 311 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 COQ8AQ8NI60 647 aa11.38□□□□□ -0.59
USP11-207ENST00000478596 ABHD5Q8WTS1 349 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms