RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 KCNE3Q9Y6H6 103 aa2.28□□□□□ -2.04
VPS13A-210ENST00000471439 LOC102725191A0A1B0GVB3 256 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 A0A1B0GW64 132 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 FAM183AA6NL82 134 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 NCBP2LA6PVI3 153 aaKnown RBP2.27□□□□□ -2.05
VPS13A-210ENST00000471439 BHLHE40O14503 412 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 CXCR1P25024 350 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 NPY1RP25929 384 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 NAA10P41227 235 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-210ENST00000471439 HERVK_113P61574 105 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 CLINT1Q14677 625 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 OR8G1Q15617 311 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 ZNF773Q6PK81 442 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 H2AFVQ71UI9 128 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 OLIG3Q7RTU3 272 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 OAFQ86UD1 273 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 TCAIMQ8N3R3 496 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 OR2T27Q8NH04 317 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 OR4S2Q8NH73 311 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 MFSD8Q8NHS3 518 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 ANGPTL6Q8NI99 470 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 DYNLRB2Q8TF09 96 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 CHMP6Q96FZ7 201 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 OR2H1Q9GZK4 316 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 CHST5Q9GZS9 411 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 IL22Q9GZX6 179 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 SLC38A1Q9H2H9 487 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 MRM2Q9UI43 246 aaKnown RBP2.27□□□□□ -2.05
VPS13A-210ENST00000471439 ZNF222Q9UK12 451 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 SIGLEC7Q9Y286 467 aa2.27□□□□□ -2.05
VPS13A-210ENST00000471439 IGHV3-66A0A0C4DH42 116 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 A0A1W2PRG6 482 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 LEUTXA8MZ59 168 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 DYNC1I1O14576 645 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 AIM2O14862 343 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 LSM1O15116 133 aaKnown RBP2.26□□□□□ -2.05
VPS13A-210ENST00000471439 ZNF324O75467 553 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-210ENST00000471439 S1PR2O95136 353 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 GABARAPO95166 117 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 ACSM4P0C7M7 580 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 TROVE2P10155 538 aaKnown RBP eCLIP2.26□□□□□ -2.05
VPS13A-210ENST00000471439 PIPP12273 146 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-210ENST00000471439 DCKP27707 260 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 GABRA2P47869 451 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 CRISP1P54107 249 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 RWDD2BP57060 319 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 ZNF141Q15928 474 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 ZNF726P1Q15940 193 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 TPTE2P1Q5T6R2 138 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 PLET1Q6UQ28 207 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 WDR82Q6UXN9 313 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 TEX43Q6ZNM6 134 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 CALHM1Q8IU99 346 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 OR10G4Q8NGN3 311 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 OR10J6PQ8NGY7 276 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 HAVCR2Q8TDQ0 301 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 GALNT14Q96FL9 552 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 IFI27L2Q9H2X8 130 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 PIGUQ9H490 435 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 C12orf10Q9HB07 376 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 RNF11Q9Y3C5 154 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 GOLT1BQ9Y3E0 138 aa2.26□□□□□ -2.05
VPS13A-210ENST00000471439 AMMECR1Q9Y4X0 333 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-210ENST00000471439 IGKV2D-24A0A075B6R9 120 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 IGKV1D-17A0A075B6S4 117 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 IGHV3-74A0A0B4J1X5 117 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 ARRDC5A6NEK1 342 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 DNALI1O14645 258 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-210ENST00000471439 MAGEB4O15481 346 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-210ENST00000471439 SPAG7O75391 227 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 SERPINA1P01009 418 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 IGKV1D-33P01593 117 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 IGKV1-33P01594 117 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 IFI6P09912 130 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 ZNF728P0DKX0 622 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 MIFP14174 115 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 HTN3P15516 51 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 TAC1P20366 129 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 GRPRP30550 384 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 GPX4P36969 197 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-210ENST00000471439 CEACAM6P40199 344 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 CCL18P55774 89 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 IBA57Q5T440 356 aaKnown RBP2.25□□□□□ -2.05
VPS13A-210ENST00000471439 CLEC19AQ6UXS0 136 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 SSX7Q7RTT5 188 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 TCF23Q7RTU1 214 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 PEX26Q7Z412 305 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 SAXO1Q8IYX7 474 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 STACQ99469 402 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 ADAT1Q9BUB4 502 aaKnown RBP2.25□□□□□ -2.05
VPS13A-210ENST00000471439 TMEM133Q9H2Q1 129 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 GOLPH3Q9H4A6 298 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 OPTCQ9UBM4 332 aa2.25□□□□□ -2.05
VPS13A-210ENST00000471439 TRAV41A0A0B4J266 112 aa2.24□□□□□ -2.05
VPS13A-210ENST00000471439 TMEM120BA0PK00 339 aa2.24□□□□□ -2.05
VPS13A-210ENST00000471439 K7EMT4 169 aa2.24□□□□□ -2.05
VPS13A-210ENST00000471439 NUPL2O15504 423 aaKnown RBP2.24□□□□□ -2.05
VPS13A-210ENST00000471439 AIREO43918 545 aa2.24□□□□□ -2.05
VPS13A-210ENST00000471439 GMDSO60547 372 aa2.24□□□□□ -2.05
VPS13A-210ENST00000471439 OR2A4O95047 310 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms