RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 FANCD2OSQ96PS1 177 aa9.08□□□□□ -0.96
PTPRF-211ENST00000467464 OR2A7Q96R45 310 aa9.08□□□□□ -0.96
PTPRF-211ENST00000467464 CCL28Q9NRJ3 127 aa9.08□□□□□ -0.96
PTPRF-211ENST00000467464 ANAPC10Q9UM13 185 aa9.08□□□□□ -0.96
PTPRF-211ENST00000467464 NPIPB5A8MRT5 1133 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 MPPED1O15442 326 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 OR2J3O76001 311 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 PPYP01298 95 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 CRYGCP07315 174 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 AREGP15514 252 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 EDN2P20800 178 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 FCGR2CP31995 323 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 RPL27AP46776 148 aaKnown RBP9.07□□□□□ -0.96
PTPRF-211ENST00000467464 ATP5G2Q06055 141 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 RPEL1Q2QD12 228 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 NECAP1Q8NC96 275 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 MUC7Q8TAX7 377 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 SECTM1Q8WVN6 248 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 YIPF6Q96EC8 236 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 CCDC140Q96MF4 163 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 DCUN1D5Q9BTE7 237 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 SLC2A9Q9NRM0 540 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 ZNF257Q9Y2Q1 563 aa9.07□□□□□ -0.96
PTPRF-211ENST00000467464 H0Y980 276 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 RBFOX2O43251 390 aaKnown RBP eCLIP9.06□□□□□ -0.966e-8■■■■■ 36.9
PTPRF-211ENST00000467464 TNFSF12O43508 249 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 TMEM127O75204 238 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 ACTL6BO94805 426 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 FCER2P06734 321 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 CTRB1P17538 263 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 MAS1LP35410 378 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 ARPC4P59998 168 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 POU2AF1Q16633 256 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 C15orf32Q32M92 178 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 TIMM50Q3ZCQ8 353 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 CTRB2Q6GPI1 263 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 ZNF818PQ6ZRF7 136 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 SSX9Q7RTT3 188 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 Q8N402 240 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 VSTM2AQ8TAG5 236 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 BET1LQ9NYM9 111 aa9.06□□□□□ -0.96
PTPRF-211ENST00000467464 TRAV3A0A0B4J244 114 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 MEIS3P1A6NDR6 274 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 PPP5D1E7EU14 171 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 NDUFB8O95169 186 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 HLA-AP01891 365 aaKnown RBP9.05□□□□□ -0.96
PTPRF-211ENST00000467464 RPS19P39019 145 aaKnown RBP9.05□□□□□ -0.96
PTPRF-211ENST00000467464 KIR2DS2P43631 304 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 CASC10Q5T4H9 136 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 OR4A47Q6IF82 309 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 LCN12Q6JVE5 192 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 SLC25A42Q86VD7 318 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 ZBTB34Q8NCN2 500 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 OR5AP2Q8NGF4 316 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 OR2K2Q8NGT1 345 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 GIMAP1Q8WWP7 306 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 FYTTD1Q96QD9 318 aaKnown RBP9.05□□□□□ -0.96
PTPRF-211ENST00000467464 EDA2RQ9HAV5 297 aa9.05□□□□□ -0.96
PTPRF-211ENST00000467464 IGLC7A0M8Q6 106 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 ZNF785A8K8V0 405 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 SULT1C2O00338 296 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 XRCC3O43542 346 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 AIREO43918 545 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 HRASP01112 189 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 HLA-GP17693 338 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 NAT1P18440 290 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 PSMB6P28072 239 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 GNRHRP30968 328 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 CBX5P45973 191 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 OR2B8PP59922 312 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 RPL8P62917 257 aaKnown RBP9.04□□□□□ -0.96
PTPRF-211ENST00000467464 HAGHQ16775 308 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 TATDN3Q17R31 274 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 CD300EQ496F6 205 aaPredicted RBP9.04□□□□□ -0.96
PTPRF-211ENST00000467464 LINC00322Q6ZN03 302 aaPredicted RBP9.04□□□□□ -0.96
PTPRF-211ENST00000467464 SGPP2Q8IWX5 399 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 SPAG16Q8N0X2 631 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 OR4A5Q8NH83 315 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 CITED4Q96RK1 184 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 SLC5A7Q9GZV3 580 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 ZMAT4Q9H898 229 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 ZC4H2Q9NQZ6 224 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 DIABLOQ9NR28 239 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 FBXL7Q9UJT9 491 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 CSMD3Q7Z407 3707 aa9.04□□□□□ -0.96
PTPRF-211ENST00000467464 IGLV11-55A0A075B6I3 123 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 C2orf70A6NJV1 201 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 LGALS9O00182 355 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 UPK2O00526 184 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 S1PR2O95136 353 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 OR2C1O95371 312 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 IGHV3-23P01764 117 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 FGF2P09038 288 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 TAS2R31P59538 309 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 TAS2R20P59543 309 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 FXYD4P59646 89 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 DEFB114Q30KQ6 69 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 UBE2NLQ5JXB2 153 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 DHRS11Q6UWP2 260 aa9.03□□□□□ -0.96
PTPRF-211ENST00000467464 TMEM17Q86X19 198 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms