RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 RPA2P15927 270 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 MAS1LP35410 378 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 RAB9AP51151 201 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 PIGPP57054 158 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 TPPP2P59282 170 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 PJVKQ0ZLH3 352 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 TRIM16LQ309B1 348 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 H2BFWTQ7Z2G1 175 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 MRPL41Q8IXM3 137 aaKnown RBP7.52□□□□□ -1.21
PKP4-208ENST00000462335 RSRP1Q9BUV0 290 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 HINT2Q9BX68 163 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 RBM38Q9H0Z9 239 aaKnown RBP7.52□□□□□ -1.21
PKP4-208ENST00000462335 ZNF430Q9H8G1 570 aaPredicted RBP7.52□□□□□ -1.21
PKP4-208ENST00000462335 PLEKHA2Q9HB19 425 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 TPSG1Q9NRR2 321 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 COMMD9Q9P000 198 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 ZNF580Q9UK33 172 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 VSIG4Q9Y279 399 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 KCNIP3Q9Y2W7 256 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 A0A0G2JLM5 398 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 RAMP3O60896 148 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 KBTBD11O94819 623 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 IGLV2-23P01705 113 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 APELAP0DMC3 54 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 HLA-GP17693 338 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 PI3P19957 117 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 RPL27AP46776 148 aaKnown RBP7.51□□□□□ -1.21
PKP4-208ENST00000462335 CDX1P47902 265 aaPredicted RBP7.51□□□□□ -1.21
PKP4-208ENST00000462335 MECP2P51608 486 aaKnown RBP7.51□□□□□ -1.21
PKP4-208ENST00000462335 RPL8P62917 257 aaKnown RBP7.51□□□□□ -1.21
PKP4-208ENST00000462335 LCNL1Q6ZST4 164 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 C8orf86Q6ZUL3 223 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 OR4A16Q8NH70 328 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 MARCH1Q8TCQ1 289 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 RRNAD1Q96FB5 475 aaKnown RBP7.51□□□□□ -1.21
PKP4-208ENST00000462335 OR5B12Q96R08 314 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 FXYD6Q9H0Q3 95 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 SLA2Q9H6Q3 261 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 SLC2A9Q9NRM0 540 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 FKBP11Q9NYL4 201 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 NUBP2Q9Y5Y2 271 aa7.51□□□□□ -1.21
PKP4-208ENST00000462335 ANKRD20A5PA0PJZ0 165 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 CCL24O00175 119 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 S1PR2O95136 353 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 CD74P04233 296 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 CRYGBP07316 175 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 OR9G9P0C7N8 305 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 ANXA3P12429 323 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 MYCNOSP40205 109 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 AKR1C2P52895 323 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 TCTEX1D4Q5JR98 221 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 OR4A47Q6IF82 309 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 FAAP20Q6NZ36 180 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 SGPP2Q8IWX5 399 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 OR4D10Q8NGI6 311 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 OR51S1Q8NGJ8 323 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 OR4C16Q8NGL9 310 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 OR6Q1Q8NGQ2 317 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 OR13C8Q8NGS7 320 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 TMEM167AQ8TBQ9 72 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 SRSF12Q8WXF0 261 aaKnown RBP7.5□□□□□ -1.21
PKP4-208ENST00000462335 UBE2E2Q96LR5 201 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 TSC22D3Q99576 134 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 PDCD10Q9BUL8 212 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 GPR61Q9BZJ8 451 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 TMEM140Q9NV12 185 aa7.5□□□□□ -1.21
PKP4-208ENST00000462335 PIGBOS1A0A0B4J2F0 54 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 C3orf85A0A1B0GTC6 90 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 LINC00854A0A1B0GVQ3 168 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 MARCH11A6NNE9 402 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 H3BUA1 57 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 ARPC1BO15143 372 aaKnown RBP7.49□□□□□ -1.21
PKP4-208ENST00000462335 B3GALNT1O75752 331 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 CTSDP07339 412 aaPredicted RBP7.49□□□□□ -1.21
PKP4-208ENST00000462335 AKR1C4P17516 323 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 PSMB8P28062 276 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 G6PCP35575 357 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 ZNF45Q02386 682 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 EIF4EBP1Q13541 118 aaPredicted RBP7.49□□□□□ -1.21
PKP4-208ENST00000462335 SURF2Q15527 256 aaPredicted RBP7.49□□□□□ -1.21
PKP4-208ENST00000462335 GDPD1Q8N9F7 314 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 MINDY2Q8NBR6 621 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 OR1L8Q8NGR8 309 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 OR1N2Q8NGR9 330 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 WIPF2Q8TF74 440 aaPredicted RBP7.49□□□□□ -1.21
PKP4-208ENST00000462335 CASTOR1Q8WTX7 329 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 C4orf3Q8WVX3 66 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 MCRIP2Q9BUT9 160 aaKnown RBP7.49□□□□□ -1.21
PKP4-208ENST00000462335 KLK15Q9H2R5 256 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 BATF3Q9NR55 127 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 FAM212BQ9NTI7 297 aaPredicted RBP7.49□□□□□ -1.21
PKP4-208ENST00000462335 BET1LQ9NYM9 111 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 PRNDQ9UKY0 176 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 OR51B2Q9Y5P1 312 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 PLXNB1O43157 2135 aa7.49□□□□□ -1.21
PKP4-208ENST00000462335 H0Y980 276 aa7.48□□□□□ -1.21
PKP4-208ENST00000462335 UPK2O00526 184 aa7.48□□□□□ -1.21
PKP4-208ENST00000462335 DUS4LO95620 317 aaKnown RBP7.48□□□□□ -1.21
PKP4-208ENST00000462335 IGLV1-40P01703 118 aa7.48□□□□□ -1.21
PKP4-208ENST00000462335 IGHV3-11P01762 117 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms