RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ACOT6Q3I5F7 207 aaPredicted RBP3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 MORN2Q502X0 79 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 PAGE3Q5JUK9 113 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 SLC25A30Q5SVS4 291 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 METTL21CQ5VZV1 264 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 DLEU7Q6UYE1 221 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 SSX9Q7RTT3 188 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 TTC9CQ8N5M4 171 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 STPG4Q8N801 248 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 CCDC63Q8NA47 563 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 TMEM190Q8WZ59 177 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 SMPD3Q9NY59 655 aaPredicted RBP3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 IGHV3-35A0A0C4DH35 117 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 DHRS7CA6NNS2 312 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 SMIM1B2RUZ4 78 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 E9PI62 339 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 K7EMT4 169 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 SOCS1O15524 211 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 IGKV3-20P01619 116 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 TTRP02766 147 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 GYPBP06028 91 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 YAP1P46937 504 aaKnown RBP3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 SLC18A1P54219 525 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 DAD1P61803 113 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 MRPL28Q13084 256 aaKnown RBP3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 LINC01620Q4KN68 170 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 ETFRF1Q6IPR1 90 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 PRR27Q6MZM9 219 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 FUNDC1Q8IVP5 155 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 SERPINA12Q8IW75 414 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 SLC35F6Q8N357 371 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 DRAXINQ8NBI3 349 aaPredicted RBP3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 OR10V1Q8NGI7 309 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 CNIH3Q8TBE1 160 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 SPDL1Q96EA4 605 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 NSL1Q96IY1 281 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 INTS14Q96SY0 518 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 TXN2Q99757 166 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 DAZ1Q9NQZ3 744 aaKnown RBP3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 ZNF581Q9P0T4 197 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 SMPXQ9UHP9 88 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 YTHDF2Q9Y5A9 579 aaKnown RBP3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 RFNGQ9Y644 331 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 S4R3C0 116 aa3.36□□□□□ -1.87
SBDSP1-204ENST00000453858 IGHV3OR16-8A0A075B7F1 116 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 A0A087WUV0 522 aaPredicted RBP3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 IGKV1-9A0A0C4DH69 117 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 TMEM269A0A1B0GVZ9 245 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 OR5H14A6NHG9 310 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 KNCNA6PVL3 124 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 PMS2P5A8MQ11 134 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 F5H768 121 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 H0YJX3 145 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 CHEK1O14757 476 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 SIVA1O15304 175 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 SRSF10O75494 262 aaKnown RBP3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 GMNNO75496 209 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 SOX14O95416 240 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 MT-ND4P03905 459 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 SAA2P0DJI9 122 aaPredicted RBP3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 RPA2P15927 270 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 CASQ1P31415 396 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 CDKN1BP46527 198 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 CAMLGP49069 296 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 LINC01547P58512 204 aaPredicted RBP3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 LIPEQ05469 1076 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 C19orf35Q6ZS72 473 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 NHLRC2Q8NBF2 726 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 SLC37A3Q8NCC5 494 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 LZICQ8WZA0 190 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 OR52D1Q9H346 318 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 XCL2Q9UBD3 114 aa3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 NUFIP1Q9UHK0 495 aaKnown RBP3.35□□□□□ -1.87
SBDSP1-204ENST00000453858 EVPLLA8MZ36 301 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 SNX3O60493 162 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 E2F6O75461 281 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 GATBO75879 557 aaKnown RBP3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 TSHBP01222 138 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 IDO1P14902 403 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 H2AFXP16104 143 aaPredicted RBP3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 SPI1P17947 270 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 TCP1P17987 556 aaKnown RBP3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 CCL1P22362 96 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 KCNJ3P48549 501 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 TMED1Q13445 227 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 ASAH1Q13510 395 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 GK3PQ14409 553 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 GNMTQ14749 295 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 KIAA1644Q3SXP7 199 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 LY6G6FQ5SQ64 297 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 OR10K2Q6IF99 312 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 FAM71F2Q6NXP2 309 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 CBR4Q8N4T8 237 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 EIF1ADQ8N9N8 165 aaKnown RBP3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 OTOSQ8NHW6 89 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 RXFP4Q8TDU9 374 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 SLC26A7Q8TE54 656 aa3.34□□□□□ -1.87
SBDSP1-204ENST00000453858 MOB3AQ96BX8 217 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms