RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CALHM2Q9HA72 323 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 PATZ1Q9HBE1 687 aaKnown RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 WFDC1Q9HC57 220 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 PEF1Q9UBV8 284 aaKnown RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 RCL1Q9Y2P8 373 aaKnown RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 TRAPPC1Q9Y5R8 145 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 R4GMQ9 66 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 CHD3Q12873 2000 aaKnown RBP3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 LRRK1Q38SD2 2015 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 EML5Q05BV3 1969 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 ATG2AQ2TAZ0 1938 aa3.52□□□□□ -1.85
HMGB1P16-201ENST00000447155 COL5A1P20908 1838 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 THADAQ6YHU6 1953 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 A0A0A6YYD4 124 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 NPIPA5A0A0B4J1W7 369 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 VSTM2BA6NLU5 285 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 CEBPZOSA8MTT3 80 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 M0R1X1 148 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 CCL25O15444 150 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 OR7C2O60412 319 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 B4GALT2O60909 372 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 MT-CO2P00403 227 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 TIMP1P01033 207 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 THY1P04216 161 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 H2BFMP0C1H6 154 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 SMIM17P0DL12 118 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 ERGP11308 486 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 GP9P14770 177 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 IGFBP3P17936 291 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 TCN2P20062 427 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 PTNP21246 168 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 CAPZBP47756 277 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 NPBWR2P48146 333 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 CDC34P49427 236 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 ERVS71-1P61550 626 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 SUPT4H1P63272 117 aaKnown RBP3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 RHOGP84095 191 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 SERF2P84101 59 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 MEF2BQ02080 365 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 IL15RAQ13261 267 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 NUMA1Q14980 2115 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 MSMO1Q15800 293 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 CDKN3Q16667 212 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 SNAI3Q3KNW1 292 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 LRRC10Q5BKY1 277 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 FAM162BQ5T6X4 162 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 LINC01590Q5TEZ4 76 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 PRAMEF20Q5VT98 475 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 C19orf35Q6ZS72 473 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 BHLHA15Q7RTS1 189 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 BAGE3Q86Y29 109 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 BAGE2Q86Y30 109 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 TMEM123Q8N131 208 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 MAPK1IP1LQ8NDC0 245 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 OR52R1Q8NGF1 315 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 OR51G1Q8NGK1 321 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 OR5D18Q8NGL1 313 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 OR4D5Q8NGN0 318 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 VN1R17PQ8TDU5 208 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 PSMF1Q92530 271 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 FGF14Q92915 247 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 BORCS7Q96B45 105 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 GPR146Q96CH1 333 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 FOXN4Q96NZ1 517 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 TSPAN32Q96QS1 320 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 RARRES2Q99969 163 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 HSPB9Q9BQS6 159 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 TXNDC17Q9BRA2 123 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 MRPL13Q9BYD1 178 aaKnown RBP3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 LPAR5Q9H1C0 372 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 SH3BGRL3Q9H299 93 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 ZDHHC11Q9H8X9 412 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 ELOVL3Q9HB03 270 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 ZNF286AQ9HBT8 521 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 NECAP2Q9NVZ3 263 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 KLHDC2Q9Y2U9 406 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 SCN10AQ9Y5Y9 1956 aa3.51□□□□□ -1.85
HMGB1P16-201ENST00000447155 IGHV2-26A0A0B4J1V2 119 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 A0A1W2PPR1 153 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 LRP5LA4QPB2 252 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 RBFOX2O43251 390 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 XRCC2O43543 280 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 PDE6DO43924 150 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 SSSCA1O60232 199 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 SMPD2O60906 423 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 ZNF253O75346 499 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 S1PR2O95136 353 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 LYPD3O95274 346 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 SERPINA7P05543 415 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 OR10J4P0C629 311 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 NBEAP1P0C6P0 100 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 ZNF728P0DKX0 622 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 ZNF823P16415 610 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 CRISP2P16562 243 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 HMGA1P17096 107 aaKnown RBP3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 FUT1P19526 365 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 CMPK1P30085 196 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 ZNF93P35789 620 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 TFPI2P48307 235 aa3.5□□□□□ -1.85
HMGB1P16-201ENST00000447155 ZNF154Q13106 437 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms