RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 CKLFQ9UBR5 152 aa6.95□□□□□ -1.3
SMPD4-208ENST00000439029 AK3Q9UIJ7 227 aa6.95□□□□□ -1.3
SMPD4-208ENST00000439029 ETV7Q9Y603 341 aa6.95□□□□□ -1.3
SMPD4-208ENST00000439029 IGLV11-55A0A075B6I3 123 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 ZNF705EA8MWA4 302 aaPredicted RBP6.94□□□□□ -1.3
SMPD4-208ENST00000439029 TGOLN2O43493 480 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 CRYGCP07315 174 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 NPY1RP25929 384 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 PSMD7P51665 324 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 EMP1P54849 157 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 CMC4P56277 68 aaPredicted RBP6.94□□□□□ -1.3
SMPD4-208ENST00000439029 MRPL28Q13084 256 aaKnown RBP6.94□□□□□ -1.3
SMPD4-208ENST00000439029 RNF212Q495C1 297 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 FAM24BQ8N5W8 94 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 GGHQ92820 318 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 CXorf58Q96LI9 332 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 RHPN1-AS1Q9BWJ2 59 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 Q9N2K0 584 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 PLEKHJ1Q9NW61 149 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 TBC1D24Q9ULP9 559 aa6.94□□□□□ -1.3
SMPD4-208ENST00000439029 HMCN2Q8NDA2 5059 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 A0A0A6YYD4 124 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 NBDYA0A0U1RRE5 68 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 J3QRK9 145 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 CHEK1O14757 476 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 BET1O15155 118 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 CREBL2O60519 120 aaPredicted RBP6.93□□□□□ -1.3
SMPD4-208ENST00000439029 FCGR3BO75015 233 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 DHFRP00374 187 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 SMR3BP02814 79 aaPredicted RBP6.93□□□□□ -1.3
SMPD4-208ENST00000439029 RRASP10301 218 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 HIST1H1BP16401 226 aaKnown RBP6.93□□□□□ -1.3
SMPD4-208ENST00000439029 CRHBPP24387 322 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 DUTP33316 252 aaKnown RBP6.93□□□□□ -1.3
SMPD4-208ENST00000439029 PLA2G7Q13093 441 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 FLOT2Q14254 428 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 RPL22L1Q6P5R6 122 aaKnown RBP6.93□□□□□ -1.3
SMPD4-208ENST00000439029 AMIGO2Q86SJ2 522 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 STHQ8IWL8 128 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 LYPD1Q8N2G4 141 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 ZFP41Q8N8Y5 198 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 FRZBQ92765 325 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 GABARAPL3Q9BY60 117 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 YTHDF1Q9BYJ9 559 aaKnown RBP6.93□□□□□ -1.3
SMPD4-208ENST00000439029 GABARAPL1Q9H0R8 117 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 OR51E2Q9H255 320 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 SMPXQ9UHP9 88 aa6.93□□□□□ -1.3
SMPD4-208ENST00000439029 RBM7Q9Y580 266 aaKnown RBP6.93□□□□□ -1.3
SMPD4-208ENST00000439029 IGHV7-4-1A0A0J9YVY3 117 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 TRBV5-5A0A0J9YX44 114 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 TCRBV3S1A0A5B6 114 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 KNCNA6PVL3 124 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 SOCS1O15524 211 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 ZNF735P0CB33 412 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 XGP55808 180 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 DLK1P80370 383 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 HSP90B2PQ58FF3 399 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 IGSF11Q5DX21 431 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 TMEM116Q8NCL8 245 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 OR52I1Q8NGK6 324 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 OSR1Q8TAX0 266 aaPredicted RBP6.92□□□□□ -1.3
SMPD4-208ENST00000439029 OR2A7Q96R45 310 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 TMED3Q9Y3Q3 217 aa6.92□□□□□ -1.3
SMPD4-208ENST00000439029 TRBV6-6A0A0A6YYG2 114 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 CGB1A6NKQ9 187 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 TRDCB7Z8K6 153 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 NDUFA4O00483 81 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 LALBAP00709 142 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 LIMS3P0CW19 117 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 LIMS4P0CW20 117 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 PTBP1P26599 531 aaKnown RBP eCLIP6.91□□□□□ -1.37e-7■■■■□ 19.6
SMPD4-208ENST00000439029 RPS11P62280 158 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMPD4-208ENST00000439029 TPBGQ13641 420 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 ATP6AP1Q15904 470 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 ZIK1Q3SY52 487 aaPredicted RBP6.91□□□□□ -1.3
SMPD4-208ENST00000439029 Q499Y3 187 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 MEDAGQ5VYS4 303 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 TCF24Q7RTU0 167 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 UBAC2Q8NBM4 344 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 TRUB1Q8WWH5 349 aaKnown RBP6.91□□□□□ -1.3
SMPD4-208ENST00000439029 CMTM3Q96MX0 182 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 MYCBPQ99417 103 aaPredicted RBP6.91□□□□□ -1.3
SMPD4-208ENST00000439029 TMEM59Q9BXS4 323 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 TMEM14BQ9NUH8 114 aa6.91□□□□□ -1.3
SMPD4-208ENST00000439029 TRBV5-7A0A0A0MS05 114 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 IGHV3-66A0A0C4DH42 116 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 PNMA8CA0A1B0GUJ8 204 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 K7EMT4 169 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 DNASE2O00115 360 aaPredicted RBP6.9□□□□□ -1.3
SMPD4-208ENST00000439029 NUPL2O15504 423 aaKnown RBP6.9□□□□□ -1.3
SMPD4-208ENST00000439029 DCTN3O75935 186 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 KBTBD11O94819 623 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 YIF1AO95070 293 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 HOXB6P17509 224 aaKnown RBP6.9□□□□□ -1.3
SMPD4-208ENST00000439029 UNC119Q13432 240 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 LIPKQ5VXJ0 399 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 FAM90A2PQ658T7 463 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 TMEM88Q6PEY1 159 aa6.9□□□□□ -1.3
SMPD4-208ENST00000439029 MORN3Q6PF18 240 aaPredicted RBP6.9□□□□□ -1.3
SMPD4-208ENST00000439029 TRPT1Q86TN4 253 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms