RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 CCDC190Q86UF4 302 aa13.5□□□□□ -0.25
CTSD-203ENST00000429746 ARRDC1Q8N5I2 433 aa13.5□□□□□ -0.25
CTSD-203ENST00000429746 SRSF12Q8WXF0 261 aaKnown RBP13.5□□□□□ -0.25
CTSD-203ENST00000429746 CCDC160A6NGH7 325 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 OR2A4O95047 310 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 IGKV1-39P01597 117 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 IGKV1D-39P04432 117 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 MYCNOSP40205 109 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 CATR1Q13166 79 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 TNXAQ16473 311 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 OXLD1Q5BKU9 147 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 RNASE10Q5GAN6 216 aaKnown RBP13.49□□□□□ -0.25
CTSD-203ENST00000429746 OR4A47Q6IF82 309 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 STEAP1BQ6NZ63 245 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 OR5M8Q8NGP6 311 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 TRIM63Q969Q1 353 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 OR2A7Q96R45 310 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 PLEKHA2Q9HB19 425 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 BET1LQ9NYM9 111 aa13.49□□□□□ -0.25
CTSD-203ENST00000429746 ANKRD20A5PA0PJZ0 165 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 DPPA5A6NC42 116 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 MSGN1A6NI15 193 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 HPRT1P00492 218 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 F2RP25116 425 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 TAS2R31P59538 309 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 TAS2R19P59542 299 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 TSPAN5P62079 268 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 TMEM267Q0VDI3 215 aaPredicted RBP13.48□□□□□ -0.25
CTSD-203ENST00000429746 PHLDA2Q53GA4 152 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 SSX9Q7RTT3 188 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 MMD2Q8IY49 270 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 ADAD2Q8NCV1 583 aaKnown RBP13.48□□□□□ -0.25
CTSD-203ENST00000429746 ABHD5Q8WTS1 349 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 DGCR14Q96DF8 476 aaKnown RBP13.48□□□□□ -0.25
CTSD-203ENST00000429746 ALX4Q9H161 411 aaPredicted RBP13.48□□□□□ -0.25
CTSD-203ENST00000429746 SLC2A9Q9NRM0 540 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 RABL2AQ9UBK7 228 aaPredicted RBP13.48□□□□□ -0.25
CTSD-203ENST00000429746 RABL2BQ9UNT1 228 aa13.48□□□□□ -0.25
CTSD-203ENST00000429746 CCL24O00175 119 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 CNIH1O95406 144 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 RAB3DO95716 219 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 HRASP01112 189 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 APELAP0DMC3 54 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 IGLL1P15814 213 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 PI3P19957 117 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 RND3P61587 244 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 ZNF45Q02386 682 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 TBC1D26Q86UD7 250 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 SLC38A6Q8IZM9 456 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 POC5Q8NA72 575 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 OR5T1Q8NG75 326 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 OR4C16Q8NGL9 310 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 OR13C8Q8NGS7 320 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 BORCS5Q969J3 196 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 COMMD9Q9P000 198 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 VSIG4Q9Y279 399 aa13.47□□□□□ -0.25
CTSD-203ENST00000429746 FABP12A6NFH5 140 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 NUDT19A8MXV4 375 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 PF4P02776 101 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 NQO2P16083 231 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 PTBP1P26599 531 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTSD-203ENST00000429746 DEFA5Q01523 94 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 KLK9Q2XQG4 91 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 C19orf35Q6ZS72 473 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 CADM3Q8N126 398 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 TERB2Q8NHR7 220 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 VSTM2AQ8TAG5 236 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 CD300LFQ8TDQ1 290 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 TMEM68Q96MH6 324 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 MS4A10Q96PG2 267 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 FAM212BQ9NTI7 297 aaPredicted RBP13.46□□□□□ -0.25
CTSD-203ENST00000429746 KLK9Q9UKQ9 250 aa13.46□□□□□ -0.25
CTSD-203ENST00000429746 H3BUA1 57 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 UPK2O00526 184 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 DUS4LO95620 317 aaKnown RBP13.45□□□□□ -0.26
CTSD-203ENST00000429746 CD33P20138 364 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 ETV6P41212 452 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 LPAR6P43657 344 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 TMEM65Q6PI78 240 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 CMTM1Q8IZ96 169 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 TTC9CQ8N5M4 171 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 OR6Q1Q8NGQ2 317 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 OR5B12Q96R08 314 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 TMEM140Q9NV12 185 aa13.45□□□□□ -0.26
CTSD-203ENST00000429746 TRBV9A0A0B4J1U6 114 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 HMX3A6NHT5 357 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 MARCH11A6NNE9 402 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 FGF2P09038 288 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 LGALS1P09382 135 aaKnown RBP13.44□□□□□ -0.26
CTSD-203ENST00000429746 MAS1LP35410 378 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 PPP5CP53041 499 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 OR2B8PP59922 312 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 RPL8P62917 257 aaKnown RBP13.44□□□□□ -0.26
CTSD-203ENST00000429746 KLF9Q13886 244 aaPredicted RBP13.44□□□□□ -0.26
CTSD-203ENST00000429746 LPCAT3Q6P1A2 487 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 OR11H1Q8NG94 326 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 OR4A5Q8NH83 315 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 MARCH1Q8TCQ1 289 aa13.44□□□□□ -0.26
CTSD-203ENST00000429746 ZNF486Q96H40 463 aaPredicted RBP13.44□□□□□ -0.26
CTSD-203ENST00000429746 SEC22AQ96IW7 307 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms