RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 EGR2P11161 476 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-202ENST00000422544 NQO2P16083 231 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 AKR1C4P17516 323 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 BTCP35070 178 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 G6PCP35575 357 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 NDPQ00604 133 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 IFITM3Q01628 133 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 C10orf99Q6UWK7 81 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 TMED4Q7Z7H5 227 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 ZNF329Q86UD4 541 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 PUSL1Q8N0Z8 303 aaKnown RBP7.3□□□□□ -1.24
PDGFC-202ENST00000422544 STPG2Q8N412 459 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 C11orf44Q8N8P7 122 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 DMBX1Q8NFW5 382 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 OR5AU1Q8NGC0 362 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 ABHD5Q8WTS1 349 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 TMEM230Q96A57 120 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 R3HDM4Q96D70 268 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 AIFM2Q9BRQ8 373 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 FAM103A1Q9BTL3 118 aaKnown RBP7.3□□□□□ -1.24
PDGFC-202ENST00000422544 NAA60Q9H7X0 242 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 ZNF430Q9H8G1 570 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-202ENST00000422544 COMMD9Q9P000 198 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 FBXO7Q9Y3I1 522 aa7.3□□□□□ -1.24
PDGFC-202ENST00000422544 TRAV3A0A0B4J244 114 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 PSMB11A5LHX3 300 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 G3V318 75 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 KBTBD11O94819 623 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 NDUFB6O95139 128 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 IGF1P05019 195 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 OR5AC1P0C628 307 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 CD28P10747 220 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 ERVK-16P61578 105 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 SSBP2P81877 361 aaPredicted RBP7.29□□□□□ -1.24
PDGFC-202ENST00000422544 RBMS2Q15434 407 aaKnown RBP7.29□□□□□ -1.24
PDGFC-202ENST00000422544 TNXAQ16473 311 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 POU2AF1Q16633 256 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 TRIM16LQ309B1 348 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 OR4A47Q6IF82 309 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 SGPP2Q8IWX5 399 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 GRPEL2Q8TAA5 225 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 VSTM2AQ8TAG5 236 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 TMEM167AQ8TBQ9 72 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 WIPF2Q8TF74 440 aaPredicted RBP7.29□□□□□ -1.24
PDGFC-202ENST00000422544 CHPT1Q8WUD6 406 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 ARPC1AQ92747 370 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 FAM212BQ9NTI7 297 aaPredicted RBP7.29□□□□□ -1.24
PDGFC-202ENST00000422544 TMEM140Q9NV12 185 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 BET1LQ9NYM9 111 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 PRR13Q9NZ81 148 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 TBC1D24Q9ULP9 559 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 FLVCR2Q9UPI3 526 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 DNAH3Q8TD57 4116 aa7.29□□□□□ -1.24
PDGFC-202ENST00000422544 PLXNB1O43157 2135 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 TRAV41A0A0B4J266 112 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 MSGN1A6NI15 193 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 MARCH11A6NNE9 402 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 UPK2O00526 184 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 CREBL2O60519 120 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-202ENST00000422544 B3GALNT1O75752 331 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 ACTL6BO94805 426 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 OPN1MWP04001 364 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 IL6RP08887 468 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-202ENST00000422544 OPN1MW2P0DN77 364 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 OPN1MW3P0DN78 364 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 MYOD1P15172 320 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 VDAC1P21796 283 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 UCP1P25874 307 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 SUPT4H1P63272 117 aaKnown RBP7.28□□□□□ -1.24
PDGFC-202ENST00000422544 PRR20EP86478 221 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 PRR20CP86479 221 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 PRR20DP86480 221 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 PRR20BP86481 221 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 PRR20AP86496 221 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 DHODHQ02127 395 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 ECSCRQ19T08 205 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 C10orf55Q5SWW7 151 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 SHISA2Q6UWI4 295 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 MMD2Q8IY49 270 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 LFNGQ8NES3 379 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 OR4A5Q8NH83 315 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 SGMS2Q8NHU3 365 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 GLYATL2Q8WU03 294 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 SEC22AQ96IW7 307 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 TMEM222Q9H0R3 208 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 KCNIP3Q9Y2W7 256 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 NSG2Q9Y328 171 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 NUBP2Q9Y5Y2 271 aa7.28□□□□□ -1.24
PDGFC-202ENST00000422544 FBXO24O75426 580 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 CDS2O95674 445 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 IGKV1-5P01602 117 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 OR9G9P0C7N8 305 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 APELAP0DMC3 54 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 HLA-GP17693 338 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 ANXA7P20073 488 aaKnown RBP7.27□□□□□ -1.25
PDGFC-202ENST00000422544 PPIFP30405 207 aaKnown RBP7.27□□□□□ -1.25
PDGFC-202ENST00000422544 SLC6A1P30531 599 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 RPL8P62917 257 aaKnown RBP7.27□□□□□ -1.25
PDGFC-202ENST00000422544 SLC35B1P78383 322 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 CFHR3Q02985 330 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms