RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 PUSL1Q8N0Z8 303 aaKnown RBP19.33■□□□□ 0.68
VEGFA-208ENST00000417285 SAMD12Q8N8I0 201 aa19.33■□□□□ 0.68
VEGFA-208ENST00000417285 NECAP1Q8NC96 275 aa19.33■□□□□ 0.68
VEGFA-208ENST00000417285 SLC5A7Q9GZV3 580 aa19.33■□□□□ 0.68
VEGFA-208ENST00000417285 AKIP1Q9NQ31 210 aa19.33■□□□□ 0.68
VEGFA-208ENST00000417285 MEIS3P1A6NDR6 274 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 MAS1LP35410 378 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 BRWD1-AS2P59051 145 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 FXYD4P59646 89 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 TMEM69Q5SWH9 247 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 C10orf55Q5SWW7 151 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 HAPLN4Q86UW8 402 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 TMEM167AQ8TBQ9 72 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 GIMAP1Q8WWP7 306 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 AIFM2Q9BRQ8 373 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 PEMTQ9UBM1 199 aa19.32■□□□□ 0.68
VEGFA-208ENST00000417285 RBMXL2O75526 392 aaKnown RBP19.31■□□□□ 0.68
VEGFA-208ENST00000417285 TRBV12-3P01733 135 aa19.31■□□□□ 0.68
VEGFA-208ENST00000417285 CSN3P07498 182 aa19.31■□□□□ 0.68
VEGFA-208ENST00000417285 IGHV4-30-4P0DP06 118 aa19.31■□□□□ 0.68
VEGFA-208ENST00000417285 CATR1Q13166 79 aa19.31■□□□□ 0.68
VEGFA-208ENST00000417285 KCTD12Q96CX2 325 aaKnown RBP19.31■□□□□ 0.68
VEGFA-208ENST00000417285 GPHA2Q96T91 129 aa19.31■□□□□ 0.68
VEGFA-208ENST00000417285 C19orf73Q9NVV2 129 aa19.31■□□□□ 0.68
VEGFA-208ENST00000417285 RPL27AP46776 148 aaKnown RBP19.3■□□□□ 0.68
VEGFA-208ENST00000417285 TAS2R20P59543 309 aa19.3■□□□□ 0.68
VEGFA-208ENST00000417285 HERV-K104P61576 105 aa19.3■□□□□ 0.68
VEGFA-208ENST00000417285 LCN12Q6JVE5 192 aa19.3■□□□□ 0.68
VEGFA-208ENST00000417285 SPAG16Q8N0X2 631 aa19.3■□□□□ 0.68
VEGFA-208ENST00000417285 BORCS5Q969J3 196 aa19.3■□□□□ 0.68
VEGFA-208ENST00000417285 SLC25A46Q96AG3 418 aa19.3■□□□□ 0.68
VEGFA-208ENST00000417285 ZNF257Q9Y2Q1 563 aa19.3■□□□□ 0.68
VEGFA-208ENST00000417285 DPPA5A6NC42 116 aa19.29■□□□□ 0.68
VEGFA-208ENST00000417285 PRH1P02810 166 aa19.29■□□□□ 0.68
VEGFA-208ENST00000417285 ZNF45Q02386 682 aa19.29■□□□□ 0.68
VEGFA-208ENST00000417285 EXOSC2Q13868 293 aaKnown RBP19.29■□□□□ 0.68
VEGFA-208ENST00000417285 SSX9Q7RTT3 188 aa19.29■□□□□ 0.68
VEGFA-208ENST00000417285 TMEM17Q86X19 198 aa19.29■□□□□ 0.68
VEGFA-208ENST00000417285 Q8N402 240 aa19.29■□□□□ 0.68
VEGFA-208ENST00000417285 MUC7Q8TAX7 377 aa19.29■□□□□ 0.68
VEGFA-208ENST00000417285 EHFQ9NZC4 300 aa19.29■□□□□ 0.68
VEGFA-208ENST00000417285 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.28■□□□□ 0.68
VEGFA-208ENST00000417285 HMX3A6NHT5 357 aa19.28■□□□□ 0.68
VEGFA-208ENST00000417285 TEX22C9J3V5 150 aa19.28■□□□□ 0.68
VEGFA-208ENST00000417285 SULT1C2O00338 296 aa19.28■□□□□ 0.68
VEGFA-208ENST00000417285 RBFOX2O43251 390 aaKnown RBP eCLIP19.28■□□□□ 0.685e-9■□□□□ 10.6
VEGFA-208ENST00000417285 OR2K2Q8NGT1 345 aa19.28■□□□□ 0.68
VEGFA-208ENST00000417285 OR4A5Q8NH83 315 aa19.28■□□□□ 0.68
VEGFA-208ENST00000417285 FYTTD1Q96QD9 318 aaKnown RBP19.28■□□□□ 0.68
VEGFA-208ENST00000417285 FUNDC2Q9BWH2 189 aa19.28■□□□□ 0.68
VEGFA-208ENST00000417285 SLC2A9Q9NRM0 540 aa19.28■□□□□ 0.68
VEGFA-208ENST00000417285 ANAPC10Q9UM13 185 aa19.28■□□□□ 0.68
VEGFA-208ENST00000417285 NPIPB5A8MRT5 1133 aa19.27■□□□□ 0.68
VEGFA-208ENST00000417285 BMPR1BO00238 502 aa19.27■□□□□ 0.68
VEGFA-208ENST00000417285 TAS2R46P59540 309 aa19.27■□□□□ 0.68
VEGFA-208ENST00000417285 RPL8P62917 257 aaKnown RBP19.27■□□□□ 0.68
VEGFA-208ENST00000417285 ZNF818PQ6ZRF7 136 aa19.27■□□□□ 0.68
VEGFA-208ENST00000417285 GTSCR1Q86UQ5 136 aa19.27■□□□□ 0.68
VEGFA-208ENST00000417285 TM2D3Q9BRN9 247 aa19.27■□□□□ 0.68
VEGFA-208ENST00000417285 BET1LQ9NYM9 111 aa19.27■□□□□ 0.68
VEGFA-208ENST00000417285 ADAM30Q9UKF2 790 aa19.27■□□□□ 0.68
VEGFA-208ENST00000417285 DHFRP00374 187 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 HPRT1P00492 218 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 IL6RP08887 468 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-208ENST00000417285 ZNF735P0CB33 412 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 PRSS3P35030 304 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 MECP2P51608 486 aaKnown RBP19.26■□□□□ 0.67
VEGFA-208ENST00000417285 TAS2R31P59538 309 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 NCS1P62166 190 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 C15orf32Q32M92 178 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 OR4A47Q6IF82 309 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 OR5H2Q8NGV7 314 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 CD300LFQ8TDQ1 290 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 HRASLSQ9HDD0 168 aa19.26■□□□□ 0.67
VEGFA-208ENST00000417285 HUWE1Q7Z6Z7 4374 aaKnown RBP19.25■□□□□ 0.67
VEGFA-208ENST00000417285 OR2J3O76001 311 aa19.25■□□□□ 0.67
VEGFA-208ENST00000417285 NQO2P16083 231 aa19.25■□□□□ 0.67
VEGFA-208ENST00000417285 HLA-GP17693 338 aa19.25■□□□□ 0.67
VEGFA-208ENST00000417285 NAT1P18440 290 aa19.25■□□□□ 0.67
VEGFA-208ENST00000417285 AADACL3Q5VUY0 350 aa19.25■□□□□ 0.67
VEGFA-208ENST00000417285 DHRS11Q6UWP2 260 aa19.25■□□□□ 0.67
VEGFA-208ENST00000417285 OR51H1Q8NH63 302 aa19.25■□□□□ 0.67
VEGFA-208ENST00000417285 CMTM3Q96MX0 182 aa19.25■□□□□ 0.67
VEGFA-208ENST00000417285 ZNF2Q9BSG1 426 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-208ENST00000417285 COMMD3Q9UBI1 195 aa19.25■□□□□ 0.67
VEGFA-208ENST00000417285 SMIM31A0A1B0GVY4 71 aa19.24■□□□□ 0.67
VEGFA-208ENST00000417285 E7EUB6 86 aa19.24■□□□□ 0.67
VEGFA-208ENST00000417285 PMP2P02689 132 aa19.24■□□□□ 0.67
VEGFA-208ENST00000417285 RFX2P48378 723 aa19.24■□□□□ 0.67
VEGFA-208ENST00000417285 VBP1P61758 197 aa19.24■□□□□ 0.67
VEGFA-208ENST00000417285 MOB3AQ96BX8 217 aa19.24■□□□□ 0.67
VEGFA-208ENST00000417285 CITED4Q96RK1 184 aa19.24■□□□□ 0.67
VEGFA-208ENST00000417285 FBXL7Q9UJT9 491 aa19.24■□□□□ 0.67
VEGFA-208ENST00000417285 APOA1P02647 267 aa19.23■□□□□ 0.67
VEGFA-208ENST00000417285 EIF4EP06730 217 aaKnown RBP19.23■□□□□ 0.67
VEGFA-208ENST00000417285 CRYGCP07315 174 aa19.23■□□□□ 0.67
VEGFA-208ENST00000417285 GNRHRP30968 328 aa19.23■□□□□ 0.67
VEGFA-208ENST00000417285 POU2AF1Q16633 256 aa19.23■□□□□ 0.67
VEGFA-208ENST00000417285 THAP7Q9BT49 309 aaPredicted RBP19.23■□□□□ 0.67
VEGFA-208ENST00000417285 TUBA4BQ9H853 241 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms