RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 COX5AP20674 150 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 MAKP20794 623 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 FKBP2P26885 142 aaKnown RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OR10J1P30954 320 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ACVR1BP36896 505 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 PPOXP50336 477 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 AKR1C2P52895 323 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 BIDP55957 195 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TAS2R19P59542 299 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 RPS25P62851 125 aaKnown RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 SSBP2P81877 361 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 DGCR2P98153 550 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 AKR1C1Q04828 323 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 RPL18Q07020 188 aaKnown RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ST3GAL3Q11203 375 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ELOBQ15370 118 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TNXAQ16473 311 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 MS4A18Q3C1V0 323 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 SLC22A6Q4U2R8 563 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TCTEX1D4Q5JR98 221 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 GFI1BQ5VTD9 330 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 STUMQ69YW2 141 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OR2T2Q6IF00 324 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 C11orf87Q6NUJ2 197 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TEX43Q6ZNM6 134 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 Q6ZT83 130 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ZNF433Q8N7K0 673 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ZNF738Q8NE65 137 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OR10W1Q8NGF6 305 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OR5L1Q8NGL2 311 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OR1K1Q8NGR3 316 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OR11L1Q8NGX0 322 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OR52N5Q8NH56 324 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OR51F2Q8NH61 342 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 C15orf40Q8WUR7 153 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TOMM40LQ969M1 308 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 PIGTQ969N2 578 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 MRPL24Q96A35 216 aaKnown RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 CPNE2Q96FN4 548 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ACY3Q96HD9 319 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ZNF75AQ96N20 296 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 OXGR1Q96P68 337 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 PBDC1Q9BVG4 233 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 ULBP2Q9BZM5 246 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 POLR2J3Q9H1A7 115 aaKnown RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 LIME1Q9H400 295 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 CYTL1Q9NRR1 136 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 NECAP2Q9NVZ3 263 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 MED31Q9Y3C7 131 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 TBL2Q9Y4P3 447 aaKnown RBP3.77□□□□□ -1.81
SF3B1-202ENST00000409915 PRR14LQ5THK1 2151 aa3.77□□□□□ -1.81
SF3B1-202ENST00000409915 AKAP6Q13023 2319 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 NAV2Q8IVL1 2488 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 TRAV1-2A0A0B4J238 106 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 DHRS7CA6NNS2 312 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 DEFB108AA8MXU0 73 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 OR11H12B2RN74 326 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 B4DEV8 164 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 H7C1C5 153 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 CORTO00230 105 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 SIRPB1O00241 398 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 TNFRSF11BO00300 401 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 YPEL1O60688 119 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 IGHG4P01861 327 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 MT-ND4P03905 459 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 ARG1P05089 322 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 TRGC1P0CF51 173 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 ATF1P18846 271 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 RBM34P42696 430 aaKnown RBP3.76□□□□□ -1.81
SF3B1-202ENST00000409915 RPS10P46783 165 aaKnown RBP3.76□□□□□ -1.81
SF3B1-202ENST00000409915 SULT1A2P50226 295 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 TMEM50BP56557 158 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 LCN6P62502 163 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 CDK5Q00535 292 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 SSBP1Q04837 148 aaKnown RBP3.76□□□□□ -1.81
SF3B1-202ENST00000409915 FMODQ06828 376 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 RAB40BQ12829 278 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 PTGES3Q15185 160 aaKnown RBP3.76□□□□□ -1.81
SF3B1-202ENST00000409915 CEACAM16Q2WEN9 425 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 SOHLH1Q5JUK2 328 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 PRSS54Q6PEW0 395 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 DNM1P34Q6PK57 102 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 MBOAT2Q6ZWT7 520 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 FAM57BQ71RH2 274 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 NR2C2APQ86WQ0 139 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 APRG1Q8IVJ8 170 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 NECAP1Q8NC96 275 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 OR11H1Q8NG94 326 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 OR10G2Q8NGC3 310 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 OR6N1Q8NGY5 312 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 OR1P1Q8NH06 330 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 OR11H2Q8NH07 326 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 OSR1Q8TAX0 266 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-202ENST00000409915 PLPPR1Q8TBJ4 325 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 ASB17Q8WXJ9 295 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 NEUROG1Q92886 237 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 ISOC2Q96AB3 205 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 RITA1Q96K30 269 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 YPEL2Q96QA6 119 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 SLC25A21Q9BQT8 299 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms