RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ZP3P21754 424 aa13.56□□□□□ -0.24
LSM5-204ENST00000409909 GNRHRP30968 328 aa13.56□□□□□ -0.24
LSM5-204ENST00000409909 PRSS3P35030 304 aa13.56□□□□□ -0.24
LSM5-204ENST00000409909 RHOGP84095 191 aa13.56□□□□□ -0.24
LSM5-204ENST00000409909 CTF1Q16619 201 aa13.56□□□□□ -0.24
LSM5-204ENST00000409909 SSX9Q7RTT3 188 aa13.56□□□□□ -0.24
LSM5-204ENST00000409909 TMEM17Q86X19 198 aa13.56□□□□□ -0.24
LSM5-204ENST00000409909 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
LSM5-204ENST00000409909 AKIP1Q9NQ31 210 aa13.56□□□□□ -0.24
LSM5-204ENST00000409909 PEF1Q9UBV8 284 aaKnown RBP13.56□□□□□ -0.24
LSM5-204ENST00000409909 ADAM30Q9UKF2 790 aa13.56□□□□□ -0.24
LSM5-204ENST00000409909 RBFOX2O43251 390 aaKnown RBP eCLIP13.55□□□□□ -0.24
LSM5-204ENST00000409909 APOA1P02647 267 aa13.55□□□□□ -0.24
LSM5-204ENST00000409909 MYOD1P15172 320 aa13.55□□□□□ -0.24
LSM5-204ENST00000409909 ELK1P19419 428 aa13.55□□□□□ -0.24
LSM5-204ENST00000409909 VAX1Q5SQQ9 334 aa13.55□□□□□ -0.24
LSM5-204ENST00000409909 IL34Q6ZMJ4 242 aa13.55□□□□□ -0.24
LSM5-204ENST00000409909 C19orf35Q6ZS72 473 aa13.55□□□□□ -0.24
LSM5-204ENST00000409909 HAPLN4Q86UW8 402 aa13.55□□□□□ -0.24
LSM5-204ENST00000409909 CMTM3Q96MX0 182 aa13.55□□□□□ -0.24
LSM5-204ENST00000409909 OR4C12Q96R67 309 aa13.55□□□□□ -0.24
LSM5-204ENST00000409909 ZNF2Q9BSG1 426 aaPredicted RBP13.55□□□□□ -0.24
LSM5-204ENST00000409909 HPGDSO60760 199 aa13.54□□□□□ -0.24
LSM5-204ENST00000409909 ZNF735P0CB33 412 aa13.54□□□□□ -0.24
LSM5-204ENST00000409909 MAS1LP35410 378 aa13.54□□□□□ -0.24
LSM5-204ENST00000409909 RPL27AP46776 148 aaKnown RBP13.54□□□□□ -0.24
LSM5-204ENST00000409909 HERV-K104P61576 105 aa13.54□□□□□ -0.24
LSM5-204ENST00000409909 OR4A47Q6IF82 309 aa13.54□□□□□ -0.24
LSM5-204ENST00000409909 ANKRD13BQ86YJ7 626 aa13.54□□□□□ -0.24
LSM5-204ENST00000409909 OR5H2Q8NGV7 314 aa13.54□□□□□ -0.24
LSM5-204ENST00000409909 OR51H1Q8NH63 302 aa13.54□□□□□ -0.24
LSM5-204ENST00000409909 GPX8Q8TED1 209 aa13.54□□□□□ -0.24
LSM5-204ENST00000409909 MOB3AQ96BX8 217 aa13.54□□□□□ -0.24
LSM5-204ENST00000409909 CGB1A6NKQ9 187 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 FAM223BA6NKX1 122 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 GABARAPO95166 117 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 AREGP15514 252 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 HLA-DMAP28067 261 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 HRH1P35367 487 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 RORCP51449 518 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 SYNJ2BPP57105 145 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 TAS2R46P59540 309 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 RPL8P62917 257 aaKnown RBP13.53□□□□□ -0.24
LSM5-204ENST00000409909 ATP5G2Q06055 141 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 CATR1Q13166 79 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 FAM223AQ8IWN6 122 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 OR6Q1Q8NGQ2 317 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 FYTTD1Q96QD9 318 aaKnown RBP13.53□□□□□ -0.24
LSM5-204ENST00000409909 ELOVL1Q9BW60 279 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 SLC2A9Q9NRM0 540 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 BET1LQ9NYM9 111 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 STAB2Q8WWQ8 2551 aa13.53□□□□□ -0.24
LSM5-204ENST00000409909 TRAV3A0A0B4J244 114 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 SMIM31A0A1B0GVY4 71 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 NPIPB5A8MRT5 1133 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 PGLYRP1O75594 196 aaPredicted RBP13.52□□□□□ -0.25
LSM5-204ENST00000409909 HPRT1P00492 218 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 IGLV1-51P01701 117 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 GP9P14770 177 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 HLA-GP17693 338 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 TAS2R31P59538 309 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 EXOSC2Q13868 293 aaKnown RBP13.52□□□□□ -0.25
LSM5-204ENST00000409909 POU2AF1Q16633 256 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 GPR107Q5VW38 600 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 SLC25A42Q86VD7 318 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 SNX29P2Q8IUI4 249 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 NECAP1Q8NC96 275 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 OR9G4Q8NGQ1 327 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 OR4A5Q8NH83 315 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 ZNF257Q9Y2Q1 563 aa13.52□□□□□ -0.25
LSM5-204ENST00000409909 BMPR1BO00238 502 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 OR2J3O76001 311 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 S1PR2O95136 353 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 NQO2P16083 231 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 C15orf32Q32M92 178 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 FANCD2OSQ96PS1 177 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 ASCL2Q99929 193 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 AIFM2Q9BRQ8 373 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 RSRP1Q9BUV0 290 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 FXYD6Q9H0Q3 95 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 PLEKHA2Q9HB19 425 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 SCPEP1Q9HB40 452 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 HRASLSQ9HDD0 168 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 SMAD5-AS1Q9Y6J3 95 aa13.51□□□□□ -0.25
LSM5-204ENST00000409909 HUWE1Q7Z6Z7 4374 aaKnown RBP13.51□□□□□ -0.25
LSM5-204ENST00000409909 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.5□□□□□ -0.25
LSM5-204ENST00000409909 UPK2O00526 184 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 RLN1P04808 185 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 CRYGCP07315 174 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 NHLRC4P0CG21 123 aaPredicted RBP13.5□□□□□ -0.25
LSM5-204ENST00000409909 RPA2P15927 270 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 PSMB6P28072 239 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 OR2B8PP59922 312 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 RPEL1Q2QD12 228 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 OR6F1Q8NGZ6 308 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 CD300LFQ8TDQ1 290 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 BORCS5Q969J3 196 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 DMRT1Q9Y5R6 373 aa13.5□□□□□ -0.25
LSM5-204ENST00000409909 DPPA5A6NC42 116 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms