RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 NABP2Q9BQ15 211 aa15.43■□□□□ 0.06
USP39-202ENST00000409025 RSG1Q9BU20 258 aa15.43■□□□□ 0.06
USP39-202ENST00000409025 UPK2O00526 184 aa15.43■□□□□ 0.06
USP39-202ENST00000409025 IFNA10P01566 189 aa15.43■□□□□ 0.06
USP39-202ENST00000409025 APOC3P02656 99 aa15.43■□□□□ 0.06
USP39-202ENST00000409025 IL6RP08887 468 aaPredicted RBP15.43■□□□□ 0.06
USP39-202ENST00000409025 PDPNQ86YL7 162 aa15.43■□□□□ 0.06
USP39-202ENST00000409025 TGIF2LXQ8IUE1 241 aa15.43■□□□□ 0.06
USP39-202ENST00000409025 FLYWCH2Q96CP2 140 aaKnown RBP15.43■□□□□ 0.06
USP39-202ENST00000409025 PCGF1Q9BSM1 259 aa15.43■□□□□ 0.06
USP39-202ENST00000409025 TMEM231Q9H6L2 316 aa15.43■□□□□ 0.06
USP39-202ENST00000409025 PATZ1Q9HBE1 687 aaKnown RBP15.43■□□□□ 0.06
USP39-202ENST00000409025 UQCC1Q9NVA1 299 aa15.43■□□□□ 0.06
USP39-202ENST00000409025 IGHV2-26A0A0B4J1V2 119 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 SRRM4A7MD48 611 aaKnown RBP15.42■□□□□ 0.06
USP39-202ENST00000409025 RNASEK-C17orf49H0YIS7 233 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 LIPFP07098 398 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 SNCAP37840 140 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 RPS16P62249 146 aaKnown RBP15.42■□□□□ 0.06
USP39-202ENST00000409025 DIAPH2-AS1Q14236 149 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 TMEM177Q53S58 311 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 LY6G5BQ8NDX9 201 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 TAF15Q92804 592 aaKnown RBP eCLIP15.42■□□□□ 0.06
USP39-202ENST00000409025 LHX4Q969G2 390 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 RBMXL1Q96E39 390 aaKnown RBP15.42■□□□□ 0.06
USP39-202ENST00000409025 HARBI1Q96MB7 349 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 NARFLQ9H6Q4 476 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 ENY2Q9NPA8 101 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 BET1LQ9NYM9 111 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 FAM96BQ9Y3D0 163 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 OR51B2Q9Y5P1 312 aa15.42■□□□□ 0.06
USP39-202ENST00000409025 SPTBN1Q01082 2364 aaKnown RBP15.41■□□□□ 0.06
USP39-202ENST00000409025 SCO1O75880 301 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 F12P00748 615 aaPredicted RBP15.41■□□□□ 0.06
USP39-202ENST00000409025 DVL1P1P54792 670 aaPredicted RBP15.41■□□□□ 0.06
USP39-202ENST00000409025 PUSL1Q8N0Z8 303 aaKnown RBP15.41■□□□□ 0.06
USP39-202ENST00000409025 LFNGQ8NES3 379 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 CLEC7AQ9BXN2 247 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 H2AFB1P0C5Y9 115 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 SAA1P0DJI8 122 aaPredicted RBP15.41■□□□□ 0.06
USP39-202ENST00000409025 GPR6P46095 362 aaPredicted RBP15.41■□□□□ 0.06
USP39-202ENST00000409025 SERF2P84101 59 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 TLE4Q04727 773 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 OR4C13Q8NGP0 309 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 FKBP11Q9NYL4 201 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 ONECUT1Q9UBC0 465 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 ZNF257Q9Y2Q1 563 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 WASHC3Q9Y3C0 194 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 TIMM9Q9Y5J7 89 aa15.41■□□□□ 0.06
USP39-202ENST00000409025 TET2Q6N021 2002 aaPredicted RBP15.41■□□□□ 0.06
USP39-202ENST00000409025 KBTBD11O94819 623 aa15.4■□□□□ 0.06
USP39-202ENST00000409025 CD5P06127 495 aa15.4■□□□□ 0.06
USP39-202ENST00000409025 MC5RP33032 325 aa15.4■□□□□ 0.06
USP39-202ENST00000409025 RAB13P51153 203 aa15.4■□□□□ 0.06
USP39-202ENST00000409025 VWC2Q2TAL6 325 aa15.4■□□□□ 0.06
USP39-202ENST00000409025 HLA-DRB5Q30154 266 aa15.4■□□□□ 0.06
USP39-202ENST00000409025 SSBP3Q9BWW4 388 aaPredicted RBP15.4■□□□□ 0.06
USP39-202ENST00000409025 C22orf46C9J442 243 aa15.39■□□□□ 0.05
USP39-202ENST00000409025 IGLV1-47P01700 117 aa15.39■□□□□ 0.05
USP39-202ENST00000409025 EFNA4P52798 201 aa15.39■□□□□ 0.05
USP39-202ENST00000409025 RAB11AP62491 216 aa15.39■□□□□ 0.05
USP39-202ENST00000409025 BEND2Q8NDZ0 799 aa15.39■□□□□ 0.05
USP39-202ENST00000409025 MALRD1Q5VYJ5 2156 aa15.39■□□□□ 0.05
USP39-202ENST00000409025 BTBD17A6NE02 478 aa15.39■□□□□ 0.05
USP39-202ENST00000409025 F8W036 122 aa15.39■□□□□ 0.05
USP39-202ENST00000409025 DEFA5Q01523 94 aa15.39■□□□□ 0.05
USP39-202ENST00000409025 ETV3LQ6ZN32 361 aa15.39■□□□□ 0.05
USP39-202ENST00000409025 LOC105371242A0A075B767 164 aa15.38■□□□□ 0.05
USP39-202ENST00000409025 A0A1B0GV50 99 aa15.38■□□□□ 0.05
USP39-202ENST00000409025 FGF7P21781 194 aa15.38■□□□□ 0.05
USP39-202ENST00000409025 RAB2AP61019 212 aa15.38■□□□□ 0.05
USP39-202ENST00000409025 PEA15Q15121 130 aa15.38■□□□□ 0.05
USP39-202ENST00000409025 GUK1Q16774 197 aa15.38■□□□□ 0.05
USP39-202ENST00000409025 CENPVQ7Z7K6 275 aaPredicted RBP15.38■□□□□ 0.05
USP39-202ENST00000409025 PBDC1Q9BVG4 233 aa15.38■□□□□ 0.05
USP39-202ENST00000409025 HINT2Q9BX68 163 aa15.38■□□□□ 0.05
USP39-202ENST00000409025 RRHO14718 337 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 NDUFS7O75251 213 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 GOSR1O95249 250 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 MYOD1P15172 320 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 COX7A1P24310 79 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 DLX1P56177 255 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 PRCDQ00LT1 54 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 OR4A5Q8NH83 315 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 VSTM2AQ8TAG5 236 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 EIF5A2Q9GZV4 153 aaKnown RBP15.37■□□□□ 0.05
USP39-202ENST00000409025 MS4A7Q9GZW8 240 aaPredicted RBP15.37■□□□□ 0.05
USP39-202ENST00000409025 PLEKHA3Q9HB20 300 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 AMMECR1Q9Y4X0 333 aaPredicted RBP15.37■□□□□ 0.05
USP39-202ENST00000409025 TEX50A0A1B0GTY4 177 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 BUB1B-PAK6H3BSN5 160 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 HBE1P02100 147 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 ADCYAP1P18509 176 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 C10orf91Q5T1B1 145 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 SPSB3Q6PJ21 355 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 SLC24A4Q8NFF2 622 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 OR5B3Q8NH48 314 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 SFT2D1Q8WV19 159 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 GGACTQ9BVM4 153 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 SEC11CQ9BY50 192 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms