RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 MYOD1P15172 320 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 MYL12AP19105 171 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 MAPK3P27361 379 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-202ENST00000396629 TAS2R43P59537 309 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 LAMTOR1Q6IAA8 161 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 CBR4Q8N4T8 237 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 OR5B3Q8NH48 314 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 CD300LFQ8TDQ1 290 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 CMSS1Q9BQ75 279 aaKnown RBP6.16□□□□□ -1.42
SCFD1-202ENST00000396629 PECRQ9BY49 303 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 C6orf62Q9GZU0 229 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-202ENST00000396629 IGLV11-55A0A075B6I3 123 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 PNMA8CA0A1B0GUJ8 204 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 DPPA5A6NC42 116 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 MFSD2BA6NFX1 497 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 OR4C46A6NHA9 309 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 FABP7O15540 132 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 DIRAS3O95661 229 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 BPNT1O95861 308 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 GSTT2P0CG29 244 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 GSTT2BP0CG30 244 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 RPL27AP46776 148 aaKnown RBP6.16□□□□□ -1.42
SCFD1-202ENST00000396629 IGSF11Q5DX21 431 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 PHYHIPQ92561 330 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 CXorf58Q96LI9 332 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 URM1Q9BTM9 101 aaKnown RBP6.16□□□□□ -1.42
SCFD1-202ENST00000396629 OR51E2Q9H255 320 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 HRH4Q9H3N8 390 aa6.16□□□□□ -1.42
SCFD1-202ENST00000396629 BET1O15155 118 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 DHFRP00374 187 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 AREGP15514 252 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 MAS1LP35410 378 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 IRF3Q14653 427 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 APRG1Q8IVJ8 170 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 LINC00528Q8N1L1 170 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 OR10J5Q8NHC4 309 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 ZNF502Q8TBZ5 544 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 TMEM190Q8WZ59 177 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 TMEM80Q96HE8 168 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 ARHGAP5-AS1Q96IT6 56 aa6.15□□□□□ -1.42
SCFD1-202ENST00000396629 IGHV4-4A0A075B6R2 117 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 DEFB4AO15263 64 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 CTSDP07339 412 aaPredicted RBP6.15□□□□□ -1.43
SCFD1-202ENST00000396629 CELP19835 753 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 CMC4P56277 68 aaPredicted RBP6.15□□□□□ -1.43
SCFD1-202ENST00000396629 ARFRP1Q13795 201 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 NR2C2APQ86WQ0 139 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 ZNF575Q86XF7 245 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 PUSL1Q8N0Z8 303 aaKnown RBP6.15□□□□□ -1.43
SCFD1-202ENST00000396629 POM121L12Q8N7R1 296 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 OR6M1Q8NGM8 313 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 OR4A5Q8NH83 315 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 TMEM167AQ8TBQ9 72 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 PYDC1Q8WXC3 89 aa6.15□□□□□ -1.43
SCFD1-202ENST00000396629 IGHV3-35A0A0C4DH35 117 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 FCGR3BO75015 233 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 KBTBD11O94819 623 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 CDK1P06493 297 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 GPR183P32249 361 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 INSL4Q14641 139 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 ZNF124Q15973 351 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 LGALS9BQ3B8N2 356 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 ACSM3Q53FZ2 586 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 PLAC9Q5JTB6 97 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 PLET1Q6UQ28 207 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 OR2A7Q96R45 310 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 DCUN1D5Q9BTE7 237 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 RNF126Q9BV68 326 aa6.14□□□□□ -1.43
SCFD1-202ENST00000396629 RBM7Q9Y580 266 aaKnown RBP6.14□□□□□ -1.43
SCFD1-202ENST00000396629 TRAV10A0A0B4J240 114 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 EFCAB10A6NFE3 127 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 CGB1A6NKQ9 187 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 K7EMT4 169 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 TGOLN2O43493 480 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 PSMD7P51665 324 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 RBM48Q5RL73 367 aaKnown RBP6.13□□□□□ -1.43
SCFD1-202ENST00000396629 PVRIGQ6DKI7 326 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 H1FOOQ8IZA3 346 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-202ENST00000396629 VKORC1L1Q8N0U8 176 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 Q8NAQ8 132 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 VSTM2AQ8TAG5 236 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 DAZ1Q9NQZ3 744 aaKnown RBP6.13□□□□□ -1.43
SCFD1-202ENST00000396629 M0R2N4 97 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 REG1AP05451 166 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 FCGR3AP08637 254 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 DEFA4P12838 97 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 PTBP1P26599 531 aaKnown RBP eCLIP6.13□□□□□ -1.43
SCFD1-202ENST00000396629 HLA-DMBP28068 263 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 TMEM187Q14656 261 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 SSX9Q7RTT3 188 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 C9orf16Q9BUW7 83 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 KCNK7Q9Y2U2 307 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 PRELID3BQ9Y3B1 194 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 ETV7Q9Y603 341 aa6.13□□□□□ -1.43
SCFD1-202ENST00000396629 NDUFA4O00483 81 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 RBMY1A1P0DJD3 496 aaKnown RBP6.12□□□□□ -1.43
SCFD1-202ENST00000396629 RBMY1CP0DJD4 496 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 P0DMU3 169 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 FAM231AP0DMU4 169 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 FAM231CP0DMU5 169 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms