RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 S100GP29377 79 aa12.51□□□□□ -0.41
CLTA-203ENST00000396603 RNASE10Q5GAN6 216 aaKnown RBP12.51□□□□□ -0.41
CLTA-203ENST00000396603 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
CLTA-203ENST00000396603 DHRS11Q6UWP2 260 aa12.51□□□□□ -0.41
CLTA-203ENST00000396603 GLDNQ6ZMI3 551 aaPredicted RBP12.51□□□□□ -0.41
CLTA-203ENST00000396603 SGPP2Q8IWX5 399 aa12.51□□□□□ -0.41
CLTA-203ENST00000396603 POC5Q8NA72 575 aa12.51□□□□□ -0.41
CLTA-203ENST00000396603 HSD17B10Q99714 261 aaKnown RBP12.51□□□□□ -0.41
CLTA-203ENST00000396603 PALMDQ9NP74 551 aa12.51□□□□□ -0.41
CLTA-203ENST00000396603 BATF3Q9NR55 127 aa12.51□□□□□ -0.41
CLTA-203ENST00000396603 C19orf73Q9NVV2 129 aa12.51□□□□□ -0.41
CLTA-203ENST00000396603 PRELID3BQ9Y3B1 194 aa12.51□□□□□ -0.41
CLTA-203ENST00000396603 LYSTQ99698 3801 aa12.51□□□□□ -0.41
CLTA-203ENST00000396603 DNAH1Q9P2D7 4330 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 PROP1O75360 226 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 TRGV3P03979 118 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 LGALS7P47929 136 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 RFX2P48378 723 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 TAS2R19P59542 299 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 RNASE12Q5GAN4 147 aaKnown RBP12.5□□□□□ -0.41
CLTA-203ENST00000396603 LPCAT3Q6P1A2 487 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 TMEM229BQ8NBD8 167 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 SECTM1Q8WVN6 248 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 FAM103A1Q9BTL3 118 aaKnown RBP12.5□□□□□ -0.41
CLTA-203ENST00000396603 SLC5A7Q9GZV3 580 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 SLC35D1Q9NTN3 355 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 SIGLEC8Q9NYZ4 499 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 KLK11Q9UBX7 282 aa12.5□□□□□ -0.41
CLTA-203ENST00000396603 RBMX2Q9Y388 322 aaKnown RBP12.5□□□□□ -0.41
CLTA-203ENST00000396603 C13orf42A0A1B0GVH6 325 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 H0Y980 276 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 J3QRK9 145 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 GSTZ1O43708 216 aaPredicted RBP12.49□□□□□ -0.41
CLTA-203ENST00000396603 IGHV3-11P01762 117 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 IGKV1-16P04430 117 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 IGHV4-30-4P0DP06 118 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 FXYD4P59646 89 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 RPS16P62249 146 aaKnown RBP12.49□□□□□ -0.41
CLTA-203ENST00000396603 FXYD3Q14802 87 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 ZNF66Q6ZN08 573 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 LYSMD2Q8IV50 215 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 CMTM1Q8IZ96 169 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 Q8N1Y9 231 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 ARRDC1Q8N5I2 433 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 ZNF383Q8NA42 475 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 DRAXINQ8NBI3 349 aaPredicted RBP12.49□□□□□ -0.41
CLTA-203ENST00000396603 CASTOR1Q8WTX7 329 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 MOB3AQ96BX8 217 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 MS4A10Q96PG2 267 aa12.49□□□□□ -0.41
CLTA-203ENST00000396603 ZNF2Q9BSG1 426 aaPredicted RBP12.49□□□□□ -0.41
CLTA-203ENST00000396603 IGKV1D-13A0A0B4J2D9 117 aa12.48□□□□□ -0.41
CLTA-203ENST00000396603 LCE6AA0A183 80 aa12.48□□□□□ -0.41
CLTA-203ENST00000396603 IGKV1-13P0DP09 117 aa12.48□□□□□ -0.41
CLTA-203ENST00000396603 DUTP33316 252 aaKnown RBP12.48□□□□□ -0.41
CLTA-203ENST00000396603 KIR2DS2P43631 304 aa12.48□□□□□ -0.41
CLTA-203ENST00000396603 CATR1Q13166 79 aa12.48□□□□□ -0.41
CLTA-203ENST00000396603 KLF5Q13887 457 aaPredicted RBP12.48□□□□□ -0.41
CLTA-203ENST00000396603 MEF2DQ14814 521 aa12.48□□□□□ -0.41
CLTA-203ENST00000396603 KCTD9Q7L273 389 aa12.48□□□□□ -0.41
CLTA-203ENST00000396603 SOSTQ9BQB4 213 aa12.48□□□□□ -0.41
CLTA-203ENST00000396603 EDA2RQ9HAV5 297 aa12.48□□□□□ -0.41
CLTA-203ENST00000396603 RAB3DO95716 219 aa12.47□□□□□ -0.41
CLTA-203ENST00000396603 AP3S2P59780 193 aa12.47□□□□□ -0.41
CLTA-203ENST00000396603 PYDC2Q56P42 97 aa12.47□□□□□ -0.41
CLTA-203ENST00000396603 STEAP1BQ6NZ63 245 aa12.47□□□□□ -0.41
CLTA-203ENST00000396603 OR9G4Q8NGQ1 327 aa12.47□□□□□ -0.41
CLTA-203ENST00000396603 USMG5Q96IX5 58 aa12.47□□□□□ -0.41
CLTA-203ENST00000396603 CLCC1Q96S66 551 aa12.47□□□□□ -0.41
CLTA-203ENST00000396603 SPATA25Q9BR10 227 aa12.47□□□□□ -0.41
CLTA-203ENST00000396603 AIFM2Q9BRQ8 373 aa12.47□□□□□ -0.41
CLTA-203ENST00000396603 SLC25A17O43808 307 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 CD74P04233 296 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 CD3DP04234 171 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 CRYGBP07316 175 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 AKAIN1P0CW23 69 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 FAUP35544 74 aaKnown RBP12.46□□□□□ -0.41
CLTA-203ENST00000396603 ETV6P41212 452 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 SSBP2P81877 361 aaPredicted RBP12.46□□□□□ -0.41
CLTA-203ENST00000396603 TATDN3Q17R31 274 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 CCDC190Q86UF4 302 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 OR4S2Q8NH73 311 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 GRPEL2Q8TAA5 225 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 OSR1Q8TAX0 266 aaPredicted RBP12.46□□□□□ -0.41
CLTA-203ENST00000396603 CD300LFQ8TDQ1 290 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 TCTEX1D2Q8WW35 142 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 RSRP1Q9BUV0 290 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 TINAGL1Q9GZM7 467 aaPredicted RBP12.46□□□□□ -0.41
CLTA-203ENST00000396603 CCL28Q9NRJ3 127 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 CSMD3Q7Z407 3707 aa12.46□□□□□ -0.41
CLTA-203ENST00000396603 STARD9Q9P2P6 4700 aa12.45□□□□□ -0.42
CLTA-203ENST00000396603 A6NHS1 94 aa12.45□□□□□ -0.42
CLTA-203ENST00000396603 DISC1C4P0D8 188 aa12.45□□□□□ -0.42
CLTA-203ENST00000396603 M0QYG6 137 aa12.45□□□□□ -0.42
CLTA-203ENST00000396603 SHOXO15266 292 aa12.45□□□□□ -0.42
CLTA-203ENST00000396603 CNIH1O95406 144 aa12.45□□□□□ -0.42
CLTA-203ENST00000396603 IGLV2-23P01705 113 aa12.45□□□□□ -0.42
CLTA-203ENST00000396603 UCP3P55916 312 aa12.45□□□□□ -0.42
CLTA-203ENST00000396603 VMA21Q3ZAQ7 101 aa12.45□□□□□ -0.42
CLTA-203ENST00000396603 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
CLTA-203ENST00000396603 LCN12Q6JVE5 192 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms