RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 LOC105371242A0A075B767 164 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 C5orf49A4QMS7 147 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 NKX2-6A6NCS4 301 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 FAM90A26D6RGX4 464 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 H7BYZ3 331 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 F2RL2O00254 374 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 TMEM50AO95807 157 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 RBP4P02753 201 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 CTRLP40313 264 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 NKX2-1P43699 371 aaPredicted RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 NPBWR2P48146 333 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ID3Q02535 119 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 DEFB109BQ30KR1 87 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 ABCA11PQ4W5N1 156 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 KHDC1LQ5JSQ8 128 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 PLCXD3Q63HM9 321 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 Q6ZWC4 215 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 SMIM15Q7Z3B0 74 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 OR2T10Q8NGZ9 312 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 KLF14Q8TD94 323 aaPredicted RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 CIB3Q96Q77 187 aaPredicted RBP4.47□□□□□ -1.69
VPS41-203ENST00000395969 PXMP4Q9Y6I8 212 aa4.47□□□□□ -1.69
VPS41-203ENST00000395969 CFAP54Q96N23 3096 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.46□□□□□ -1.7
VPS41-203ENST00000395969 INS-IGF2F8WCM5 200 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 TGFAP01135 160 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 IGLV2-14P01704 120 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 HLA-HP01893 362 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 CECR9P0C854 216 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 CCL11P51671 97 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 PAFAH1B2P68402 229 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 PSG7Q13046 419 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 UBE2V1Q13404 147 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 ADIRFQ15847 76 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 MORN2Q502X0 79 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 C6orf201Q7Z4U5 140 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 TMEM144Q7Z5S9 345 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 FAM58AQ8N1B3 248 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 PLPPR1Q8TBJ4 325 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 SMIM7Q9BQ49 75 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 HDHD3Q9BSH5 251 aaPredicted RBP4.46□□□□□ -1.7
VPS41-203ENST00000395969 FAM103A1Q9BTL3 118 aaKnown RBP4.46□□□□□ -1.7
VPS41-203ENST00000395969 DEFB127Q9H1M4 99 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 PATZ1Q9HBE1 687 aaKnown RBP4.46□□□□□ -1.7
VPS41-203ENST00000395969 RAB9BQ9NP90 201 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 RPRMQ9NS64 109 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 KAAG1Q9UBP8 84 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 IL19Q9UHD0 177 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 ZNF850A8MQ14 1090 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 TMEM250H0YL14 139 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 MLNRO43193 412 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 RBFOX2O43251 390 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS41-203ENST00000395969 SSSCA1O60232 199 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 ZNF737O75373 536 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 MMP23AO75900 390 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 OPN1LWP04000 364 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 PAX9P55771 341 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 LINC00310P59036 64 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 SRSF6Q13247 344 aaKnown RBP4.46□□□□□ -1.7
VPS41-203ENST00000395969 ATP6V1FQ16864 119 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 RSPO4Q2I0M5 234 aaPredicted RBP4.46□□□□□ -1.7
VPS41-203ENST00000395969 OR8G2PQ6IF36 304 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 ACP7Q6ZNF0 438 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 LINC01551Q86U37 167 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 DOLPP1Q86YN1 238 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 TMEM217Q8N7C4 229 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 STPG4Q8N801 248 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 CCDC71LQ8N9Z2 235 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 SCCPDHQ8NBX0 429 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 SLC24A4Q8NFF2 622 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 RNF2Q99496 336 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 PSMG3Q9BT73 122 aaPredicted RBP4.46□□□□□ -1.7
VPS41-203ENST00000395969 SCNM1Q9BWG6 230 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 TMEM222Q9H0R3 208 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 MAGT1Q9H0U3 335 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 CRIM1Q9NZV1 1036 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 TP53TG3Q9ULZ0 132 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 SLC45A2Q9UMX9 530 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 ST3GAL6Q9Y274 331 aa4.46□□□□□ -1.7
VPS41-203ENST00000395969 DYSFO75923 2080 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 PHF1O43189 567 aaPredicted RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 CIDEAO60543 219 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 CST7O76096 145 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 CELA3BP08861 270 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 OR5G3P0C626 314 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 BCL3P20749 454 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 ZNF137PP52743 207 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 FGF8P55075 233 aaPredicted RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 ZNF154Q13106 437 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 IGFBP7Q16270 282 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 POU2AF1Q16633 256 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 ZNF718Q3SXZ3 478 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 PHLDA2Q53GA4 152 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 NMSQ5H8A3 153 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 Q6ZR03 302 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 CXorf67Q86X51 503 aaPredicted RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 GCNT2Q8N0V5 402 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 ATOH7Q8N100 152 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 ZNF808Q8N4W9 903 aaPredicted RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 OR2D3Q8NGH3 330 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms