RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 FAM223AQ8IWN6 122 aa13.71□□□□□ -0.21
TRAPPC3-202ENST00000373162 VSTM2AQ8TAG5 236 aa13.71□□□□□ -0.21
TRAPPC3-202ENST00000373162 SECTM1Q8WVN6 248 aa13.71□□□□□ -0.21
TRAPPC3-202ENST00000373162 KCTD12Q96CX2 325 aaKnown RBP13.71□□□□□ -0.21
TRAPPC3-202ENST00000373162 WWC2-AS2Q96NR7 200 aa13.71□□□□□ -0.21
TRAPPC3-202ENST00000373162 BET1LQ9NYM9 111 aa13.71□□□□□ -0.21
TRAPPC3-202ENST00000373162 MEIS3P1A6NDR6 274 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 HMX3A6NHT5 357 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 NPIPB5A8MRT5 1133 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 FCER2P06734 321 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 CRYGCP07315 174 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 MAS1LP35410 378 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 KIR2DS2P43631 304 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 ALDH3B2P48448 385 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 NCS1P62166 190 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 DHRS11Q6UWP2 260 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 C19orf35Q6ZS72 473 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 SAMD12Q8N8I0 201 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 OR9G4Q8NGQ1 327 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 FANCD2OSQ96PS1 177 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 PHB2Q99623 299 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 FUNDC2Q9BWH2 189 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 ZNF257Q9Y2Q1 563 aa13.7□□□□□ -0.22
TRAPPC3-202ENST00000373162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 TNFSF12O43508 249 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 LY86O95711 162 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 EIF4EP06730 217 aaKnown RBP13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 CSN3P07498 182 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 MYOD1P15172 320 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 GNRHRP30968 328 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 RPL27AP46776 148 aaKnown RBP13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 SYNJ2BPP57105 145 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 ADAMTSL5Q6ZMM2 481 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 MOB3AQ96BX8 217 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 S100A16Q96FQ6 103 aaKnown RBP13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 OR4C12Q96R67 309 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 DCUN1D5Q9BTE7 237 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 SLC5A7Q9GZV3 580 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 SLC2A9Q9NRM0 540 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 U3KQK5 164 aa13.69□□□□□ -0.22
TRAPPC3-202ENST00000373162 A8MZ25 164 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 HRASP01112 189 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 FGF2P09038 288 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 CTRB1P17538 263 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 EXOSC2Q13868 293 aaKnown RBP13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 CTRB2Q6GPI1 263 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 OR4A47Q6IF82 309 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 SBSPONQ8IVN8 264 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 SPAG16Q8N0X2 631 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 NECAP1Q8NC96 275 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 GPX8Q8TED1 209 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 CMTM3Q96MX0 182 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 ELOVL1Q9BW60 279 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 FXYD6Q9H0Q3 95 aa13.68□□□□□ -0.22
TRAPPC3-202ENST00000373162 SULT1C2O00338 296 aa13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 ACTL6BO94805 426 aa13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 AREGP15514 252 aa13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 RPL5P46777 297 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 TAS2R31P59538 309 aa13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 TMEM69Q5SWH9 247 aa13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 GPR141Q7Z602 305 aa13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 LYSMD2Q8IV50 215 aa13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 OR4A5Q8NH83 315 aa13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 ASCL2Q99929 193 aa13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 C19orf73Q9NVV2 129 aa13.67□□□□□ -0.22
TRAPPC3-202ENST00000373162 TRAV3A0A0B4J244 114 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 APOA1P02647 267 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 FRMD6-AS1P0C7T7 363 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 RFX2P48378 723 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 FXYD4P59646 89 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 OR2B8PP59922 312 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 VBP1P61758 197 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 RPL8P62917 257 aaKnown RBP13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 SSX9Q7RTT3 188 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 SLC25A42Q86VD7 318 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 CADM3Q8N126 398 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 CCDC140Q96MF4 163 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 FYTTD1Q96QD9 318 aaKnown RBP13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 PLEKHA2Q9HB19 425 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 EHFQ9NZC4 300 aa13.66□□□□□ -0.22
TRAPPC3-202ENST00000373162 IGLV11-55A0A075B6I3 123 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 IGLC7A0M8Q6 106 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 UPK2O00526 184 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 MPPED1O15442 326 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 OR2J3O76001 311 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 S1PR2O95136 353 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 GABARAPO95166 117 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 HPRT1P00492 218 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 HLA-GP17693 338 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 PSMB6P28072 239 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 ATP5G2Q06055 141 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 CATR1Q13166 79 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 CTF1Q16619 201 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 C15orf32Q32M92 178 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 TMEM17Q86X19 198 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 NAA50Q9GZZ1 169 aaKnown RBP13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 IFT46Q9NQC8 304 aa13.65□□□□□ -0.22
TRAPPC3-202ENST00000373162 NDUFB8O95169 186 aa13.64□□□□□ -0.23
TRAPPC3-202ENST00000373162 NQO2P16083 231 aa13.64□□□□□ -0.23
TRAPPC3-202ENST00000373162 PRSS3P35030 304 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms