RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TRAF4Q9BUZ4 470 aaPredicted RBP13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 PRRC2BQ5JSZ5 2229 aaKnown RBP13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 GZMMP51124 257 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 ZIC4Q8N9L1 334 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 AMELYQ99218 206 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 PRSS22Q9GZN4 317 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 FBXL15Q9H469 300 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 ABCA3Q99758 1704 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 M0R381 172 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 PLA2G10O15496 165 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 GHRHP01286 108 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 C8orf82Q6P1X6 216 aaPredicted RBP13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 ACP7Q6ZNF0 438 aa13.36□□□□□ -0.27
NUCKS1-201ENST00000367142 TRAV24A0A0B4J272 114 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 NRN1LQ496H8 165 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 HIST1H2BAQ96A08 127 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 SIRT4Q9Y6E7 314 aaPredicted RBP13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 LEPP41159 167 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 ICAM4Q14773 271 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 ZNF818PQ6ZRF7 136 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 COLCA1Q6ZS62 124 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 C21orf62Q9NYP8 219 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 FOXA2Q9Y261 457 aaPredicted RBP13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 IGHV3-49A0A0A0MS15 119 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 ZIC3O60481 467 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 TTC32Q5I0X7 151 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 ZNRF1Q8ND25 227 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 SRIP30626 198 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 CLEC19AQ6UXS0 136 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 BEND2Q8NDZ0 799 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 CNTFRP26992 372 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 RPL39P5Q59GN2 51 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 DRAM1Q8N682 238 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 VGLL1Q99990 258 aa13.35□□□□□ -0.27
NUCKS1-201ENST00000367142 LOC390937A0A1W2PQ73 354 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 NPIPB4C9JG80 1138 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 GPR183P32249 361 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 RNASE4P34096 147 aaKnown RBP13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 CA7P43166 264 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 UBE2DNLQ8IWF7 75 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 AKIRIN1Q9H9L7 192 aaPredicted RBP13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 HBBP68871 147 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 MESP2Q0VG99 397 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 OR11H12B2RN74 326 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 TCF21O43680 179 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 GTSCR1Q86UQ5 136 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 OR11H1Q8NG94 326 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 OR11H2Q8NH07 326 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 TOMM7Q9P0U1 55 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 GCHFRP30047 84 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 MEF2CQ06413 473 aaPredicted RBP13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 SPSB2Q99619 263 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 LINC00862A6NCI5 91 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 RNASE6Q93091 150 aaKnown RBP13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
NUCKS1-201ENST00000367142 CRPP02741 224 aa13.33□□□□□ -0.27
NUCKS1-201ENST00000367142 IFI27L2Q9H2X8 130 aa13.33□□□□□ -0.27
NUCKS1-201ENST00000367142 PLSCR2Q9NRY7 297 aa13.33□□□□□ -0.27
NUCKS1-201ENST00000367142 TRBV5-7A0A0A0MS05 114 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 CECR9P0C854 216 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 OR1P1Q8NH06 330 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 RPRMQ9NS64 109 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 AGAP20933 346 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 WDR82Q6UXN9 313 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 IGHV3-48P01763 117 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 OTX1P32242 354 aaPredicted RBP13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 DTX2Q86UW9 622 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 SIGLEC12Q96PQ1 595 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 UQCR10Q9UDW1 63 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 A0A1W2PR77 199 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 HOXA5P20719 270 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 UCP3P55916 312 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 OR11H4Q8NGC9 324 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 JKAMPQ9P055 326 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 OR13A1Q8NGR1 328 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 TMEM160Q9NX00 188 aa13.33□□□□□ -0.28
NUCKS1-201ENST00000367142 KLK2P20151 261 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 NPBWR2P48146 333 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 ZNF79Q15937 498 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 NUDT11Q96G61 164 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 IL6RP08887 468 aaPredicted RBP13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 CDKN1AP38936 164 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 GDF15Q99988 308 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 BCORQ6W2J9 1755 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 TCRBV4S1A1TA0A5B7 111 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 CRYBA2P53672 197 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 LDLRAD2Q5SZI1 272 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 CBLN4Q9NTU7 201 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 KIAA1551Q9HCM1 1747 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 S4R3C0 116 aa13.32□□□□□ -0.28
NUCKS1-201ENST00000367142 RRHO14718 337 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 SLC25A20O43772 301 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 LEMD1Q68G75 181 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 TRGC2P03986 189 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 C8orf46Q8TAG6 207 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 IGHV2OR16-5A0A0B4J2B6 119 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 TRBV7-9A0A0J9YWB2 115 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 IGLV3-21P80748 117 aaPredicted RBP13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 FUT5Q11128 374 aa13.31□□□□□ -0.28
NUCKS1-201ENST00000367142 TMEM187Q14656 261 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms