RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SAMD5Q5TGI4 173 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 OR1L8Q8NGR8 309 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 SSBP3Q9BWW4 388 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-203ENST00000358544 A0A0U1RQV5 110 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 IGKV1D-16P01601 117 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 AREGP15514 252 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 CD38P28907 300 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 DMRTC2Q8IXT2 367 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-203ENST00000358544 IL36GQ9NZH8 169 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 C10orf91Q5T1B1 145 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 PRSS41Q7RTY9 318 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 LRRC29Q8WV35 223 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 PPIAL4EA0A075B759 164 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 PPIAL4FP0DN26 164 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 GAS1P54826 345 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 LRTM2Q8N967 370 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 SPANXCQ9NY87 97 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 CLEC1BQ9P126 229 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 PPIAL4AQ9Y536 164 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 MPC1Q9Y5U8 109 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 NYNRINQ9P2P1 1898 aaKnown RBP5.22□□□□□ -1.57
VPS13B-203ENST00000358544 K7EP34 96 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 S100A4P26447 101 aaKnown RBP5.22□□□□□ -1.57
VPS13B-203ENST00000358544 LINC01559Q495D7 138 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 PRNTQ86SH4 94 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 SLC25A33Q9BSK2 321 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 CST9LQ9H4G1 147 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 IL23AQ9NPF7 189 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 SCO2A0A1W2PP80 73 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 OOEPA6NGQ2 149 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 NGFRP08138 427 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 RPS19BP1Q86WX3 136 aaKnown RBP5.22□□□□□ -1.57
VPS13B-203ENST00000358544 IGKV1D-42A0A075B6H8 117 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 A0A0G2JMM0 328 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 A0A1W2PPB8 328 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 KIR3DP1A8MWS1 328 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 CRYBB3P26998 211 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 KIR2DL1P43626 348 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-203ENST00000358544 KIR2DL2P43627 348 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-203ENST00000358544 CDKN3Q16667 212 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 ZNF818PQ6ZRF7 136 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 MVB12AQ96EY5 273 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 LRRC61Q9BV99 259 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 NGBQ9NPG2 151 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 SBF1O95248 1867 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 LILRA5A6NI73 299 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 DSCR4P56555 118 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-203ENST00000358544 ZNF525Q8N782 197 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 PATE1Q8WXA2 126 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 PLPPR2Q96GM1 343 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 GPR35Q9HC97 309 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 ADAMTSL3P82987 1691 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A10PA6NDY2 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A18PA6NE21 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A16PA6NEW6 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A20PA6NIJ5 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A8PA6NJQ4 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A7PA6NKC0 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A22PA8MWA6 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A12PA8MX19 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A5PA8MXJ8 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A23PA8MXZ1 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A15PP0C7V4 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A13PP0C7W8 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A14PP0C7W9 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 FAM90A24PP0C7X0 464 aa5.22□□□□□ -1.57
VPS13B-203ENST00000358544 NAA38Q9BRA0 125 aaKnown RBP5.21□□□□□ -1.57
VPS13B-203ENST00000358544 AGMATQ9BSE5 352 aa5.21□□□□□ -1.57
VPS13B-203ENST00000358544 PSME4Q14997 1843 aa5.21□□□□□ -1.57
VPS13B-203ENST00000358544 CHRNA10Q9GZZ6 450 aa5.21□□□□□ -1.57
VPS13B-203ENST00000358544 ZNF716A6NP11 495 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 C1QTNF9P0C862 333 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 GFERP55789 205 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 LOXL4Q96JB6 756 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 PATE4P0C8F1 98 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 EGR1P18146 543 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 FOXA3P55318 350 aaPredicted RBP5.21□□□□□ -1.58
VPS13B-203ENST00000358544 MEF2CQ06413 473 aaPredicted RBP5.21□□□□□ -1.58
VPS13B-203ENST00000358544 GLRX2Q9NS18 164 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 BEX4Q9NWD9 120 aaPredicted RBP5.21□□□□□ -1.58
VPS13B-203ENST00000358544 TMSB15BA0A087X1C1 80 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 LINC01590Q5TEZ4 76 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 C1QTNF9BB2RNN3 333 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 RPS20P60866 119 aaKnown RBP5.21□□□□□ -1.58
VPS13B-203ENST00000358544 ADAMTSL5Q6ZMM2 481 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 CRIM1Q9NZV1 1036 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 ERGP11308 486 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 SPINK2P20155 84 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 LYG1Q8N1E2 194 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 PRELID3AQ96N28 172 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 MS4A6AQ9H2W1 248 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 COL6A5A8TX70 2615 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 APOHP02749 345 aaPredicted RBP5.21□□□□□ -1.58
VPS13B-203ENST00000358544 GABRG2P18507 467 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 ACP1P24666 158 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 PRSS12P56730 875 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 BRCA1P38398 1863 aaKnown RBP5.21□□□□□ -1.58
VPS13B-203ENST00000358544 PRR32B1ATL7 298 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 TMEM256Q8N2U0 113 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms