RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 OR10G4Q8NGN3 311 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 RXFP4Q8TDU9 374 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 RPS10P5Q9NQ39 176 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 SLC39A9Q9NUM3 307 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 PCNX1Q96RV3 2341 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 C7orf77A4D0Y5 90 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 H7C2Y5 167 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 M0R036 132 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 SOX15O60248 233 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 SNRNP70P08621 437 aaKnown RBP13.67□□□□□ -0.22
SAMM50-201ENST00000350028 IL6RP08887 468 aaPredicted RBP13.67□□□□□ -0.22
SAMM50-201ENST00000350028 HOXA1P49639 335 aaPredicted RBP13.67□□□□□ -0.22
SAMM50-201ENST00000350028 RPS16P62249 146 aaKnown RBP13.67□□□□□ -0.22
SAMM50-201ENST00000350028 RAB11AP62491 216 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 ADORA2A-AS1P86434 159 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 RHEBQ15382 184 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 HFEQ30201 348 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 ETV3LQ6ZN32 361 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 LINC00311Q8N616 119 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 TMEM14BQ9NUH8 114 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 GNG13Q9P2W3 67 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 CTSZQ9UBR2 303 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 PRNDQ9UKY0 176 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 WDR83OSQ9Y284 106 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 YLPM1P49750 1951 aaKnown RBP13.67□□□□□ -0.22
SAMM50-201ENST00000350028 EPG5Q9HCE0 2579 aa13.67□□□□□ -0.22
SAMM50-201ENST00000350028 DOCK11Q5JSL3 2073 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 MAP1LC3B2A6NCE7 125 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 IFNA1P01562 189 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 CD1BP29016 333 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 TFF3Q07654 80 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 AKIRIN2Q53H80 203 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 FAM71F2Q6NXP2 309 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 ACSM6Q6P461 480 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 OR13D1Q8NGV5 346 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 ZNF596Q8TC21 504 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 NPCDR1Q9BY65 106 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 MAP1LC3BQ9GZQ8 125 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 TUBA4BQ9H853 241 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 ENY2Q9NPA8 101 aa13.66□□□□□ -0.22
SAMM50-201ENST00000350028 SPTA1P02549 2419 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 UPK2O00526 184 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 MPDU1O75352 247 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 FSTL3O95633 263 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 BCL2P10415 239 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 PAX6P26367 422 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 LOXP28300 417 aaPredicted RBP13.65□□□□□ -0.22
SAMM50-201ENST00000350028 DLK1P80370 383 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 ZNF672Q499Z4 452 aaPredicted RBP13.65□□□□□ -0.22
SAMM50-201ENST00000350028 FFAR4Q5NUL3 377 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 SSX7Q7RTT5 188 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 MUC15Q8N387 334 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 RPP25LQ8N5L8 163 aaKnown RBP13.65□□□□□ -0.22
SAMM50-201ENST00000350028 C15orf54Q8N8G6 183 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 ZNF257Q9Y2Q1 563 aa13.65□□□□□ -0.22
SAMM50-201ENST00000350028 CTXND1A0A1B0GTU2 59 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 IGKV1D-33P01593 117 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 IGKV1-33P01594 117 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 APOA2P02652 100 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 GRNP28799 593 aaKnown RBP13.64□□□□□ -0.23
SAMM50-201ENST00000350028 ERVFRD-1P60508 538 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 OR10G9Q8NGN4 311 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 OR10G7Q8NGN6 311 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 OSR1Q8TAX0 266 aaPredicted RBP13.64□□□□□ -0.23
SAMM50-201ENST00000350028 LHX4Q969G2 390 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 ACTR3CQ9C0K3 210 aaPredicted RBP13.64□□□□□ -0.23
SAMM50-201ENST00000350028 TRBV23-1A0A0A0MS06 115 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 RRHO14718 337 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 SFTPCP11686 197 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 FGF8P55075 233 aaPredicted RBP13.64□□□□□ -0.23
SAMM50-201ENST00000350028 DLX6P56179 175 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 LY6DQ14210 128 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 ACOT6Q3I5F7 207 aaPredicted RBP13.64□□□□□ -0.23
SAMM50-201ENST00000350028 TMEM155Q4W5P6 130 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 RBMS3Q6XE24 437 aaKnown RBP13.64□□□□□ -0.23
SAMM50-201ENST00000350028 ABHD12Q8N2K0 398 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 P2RX4Q99571 388 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 FKBP11Q9NYL4 201 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 BET1LQ9NYM9 111 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 ZNRD1Q9P1U0 126 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 VAX2Q9UIW0 290 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 OR51B2Q9Y5P1 312 aa13.64□□□□□ -0.23
SAMM50-201ENST00000350028 PUS1Q9Y606 427 aaKnown RBP eCLIP13.64□□□□□ -0.23
SAMM50-201ENST00000350028 CFAP46Q8IYW2 2715 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 TET2Q6N021 2002 aaPredicted RBP13.63□□□□□ -0.23
SAMM50-201ENST00000350028 ZFP92A6NM28 416 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 COLCA2A8K830 154 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 J3QR06 171 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 CYB5BO43169 146 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 SIAH2O43255 324 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 KBTBD11O94819 623 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 CYB561D1Q8N8Q1 229 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 OR5AN1Q8NGI8 311 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 CA5BP1Q8WTZ4 195 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 TMEM204Q9BSN7 226 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 MRPL20Q9BYC9 149 aaKnown RBP13.63□□□□□ -0.23
SAMM50-201ENST00000350028 ARFGEF3Q5TH69 2177 aa13.63□□□□□ -0.23
SAMM50-201ENST00000350028 A0A087X0M5 115 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms