RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 WNK1Q9H4A3 2382 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 CREBL2O60519 120 aaPredicted RBP4.92□□□□□ -1.62
SMG1-201ENST00000330588 RAB3DO95716 219 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 CRYGCP07315 174 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 FGF2P09038 288 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 GNB3P16520 340 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 TALDO1P37837 337 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 CX3CL1P78423 397 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 PSG5Q15238 335 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 RTL8BQ17RB0 113 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 MOGAT2Q3SYC2 334 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 ZNF260Q3ZCT1 412 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 RPL39P5Q59GN2 51 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 C9orf66Q5T8R8 295 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 CNIH2Q6PI25 160 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 TMEM65Q6PI78 240 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 ZNF383Q8NA42 475 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 MRAPQ8TCY5 172 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 DDB2Q92466 427 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 FLYWCH2Q96CP2 140 aaKnown RBP4.92□□□□□ -1.62
SMG1-201ENST00000330588 ABHD14BQ96IU4 210 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 PARP12Q9H0J9 701 aaKnown RBP4.92□□□□□ -1.62
SMG1-201ENST00000330588 PALMDQ9NP74 551 aa4.92□□□□□ -1.62
SMG1-201ENST00000330588 H7C2Y5 167 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 WRBO00258 174 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 TNFAIP8O95379 198 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 SCGB1D1O95968 90 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 CRYGBP07316 175 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 SLC2A2P11168 524 aaPredicted RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 MALP21145 153 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 CNTFRP26992 372 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 CD40LGP29965 261 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 RPS19P39019 145 aaKnown RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 RAB9AP51151 201 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 AP2S1P53680 142 aaPredicted RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 RPS16P62249 146 aaKnown RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 ZNF616Q08AN1 781 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 PLA2G7Q13093 441 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 ARFRP1Q13795 201 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 PLGLAQ15195 96 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 CDNFQ49AH0 187 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 HIST2H2BDQ6DRA6 164 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 Q6ZSN1 163 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 PPP1R27Q86WC6 154 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 ZNF645Q8N7E2 425 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 TEX45Q8NA69 505 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 OSR1Q8TAX0 266 aaPredicted RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 CYYR1Q96J86 154 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 RITA1Q96K30 269 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 GINS4Q9BRT9 223 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 ATG5Q9H1Y0 275 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 OR2D2Q9H210 308 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 FBXL15Q9H469 300 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 PARP11Q9NR21 331 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 SDHAF2Q9NX18 166 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 METTL1Q9UBP6 276 aaKnown RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 LINC00527Q9UJ94 153 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 PUS1Q9Y606 427 aaKnown RBP eCLIP4.91□□□□□ -1.62
SMG1-201ENST00000330588 A0A087WXM4 84 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 A0A0B4J293 547 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 A4D1N5 150 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 RAB19A4D1S5 217 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 M0R1X1 148 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 NDUFS6O75380 124 aaKnown RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 IGLV2-23P01705 113 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 HLA-DQB1P01920 261 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 IGKV1-16P04430 117 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 LGALS1P09382 135 aaKnown RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 EGR2P11161 476 aaPredicted RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 CD36P16671 472 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 DUTP33316 252 aaKnown RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 SDC2P34741 201 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 UBE2KP61086 200 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 VAMP2P63027 116 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 DGCR2P98153 550 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 NDPQ00604 133 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 IGFL4Q6B9Z1 124 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 PET117Q6UWS5 81 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 C5orf24Q7Z6I8 188 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 LGALS14Q8TCE9 139 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 ARPC1AQ92747 370 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 BORCS5Q969J3 196 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 HSD17B10Q99714 261 aaKnown RBP4.91□□□□□ -1.62
SMG1-201ENST00000330588 OR51E2Q9H255 320 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 DAPK2Q9UIK4 370 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 OR2W1Q9Y3N9 320 aa4.91□□□□□ -1.62
SMG1-201ENST00000330588 NBEAL1Q6ZS30 2694 aa4.9□□□□□ -1.62
SMG1-201ENST00000330588 A0A0G2JLM5 398 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 G3V318 75 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 K7EIL1 84 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 TSPAN4O14817 238 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 APOA1P02647 267 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 FABP1P07148 127 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 OR4E1P0C645 316 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 OR8U9P0C7N5 309 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 ZNF735P0CB33 412 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 AADACP22760 399 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 MAS1LP35410 378 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 KIR2DS2P43631 304 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms