RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 DUX3Q96PT4 197 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 ATP6V0BQ99437 205 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 SSBP3Q9BWW4 388 aaPredicted RBP4.05□□□□□ -1.76
CAST-201ENST00000309190 IL19Q9UHD0 177 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 ANXA10Q9UJ72 324 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 TMEM30CPA0ZSE6 113 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 CRYM-AS1A6NIL9 109 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 SFTA3P0C7M3 94 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 PGA5P0DJD9 388 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 CHATP28329 748 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 ECSCRQ19T08 205 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 PYY3Q5JQD4 70 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 Q6ZS49 121 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 ZNF695Q8IW36 515 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 ARRDC1Q8N5I2 433 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 MSI2Q96DH6 328 aaKnown RBP4.05□□□□□ -1.76
CAST-201ENST00000309190 RHOFQ9HBH0 211 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 CALYQ9NYX4 217 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 A0A087WWC5 75 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 SERPINE3A8MV23 424 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 IGHV3-11P01762 117 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 S100A9P06702 114 aaKnown RBP4.05□□□□□ -1.76
CAST-201ENST00000309190 DEFA4P12838 97 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 EDN2P20800 178 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 PDLIM4P50479 330 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 ZNF134P52741 427 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 UCP3P55916 312 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 MZT1Q08AG7 82 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 FAM222BQ8WU58 562 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 RNF141Q8WVD5 230 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 CPNE2Q96FN4 548 aaPredicted RBP4.05□□□□□ -1.76
CAST-201ENST00000309190 DIRC2Q96SL1 478 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 CITED1Q99966 193 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 ATPIF1Q9UII2 106 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 INSIG2Q9Y5U4 225 aa4.05□□□□□ -1.76
CAST-201ENST00000309190 ZNF729A6NN14 1252 aaPredicted RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 DISC1C4P0D8 188 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 LY86O95711 162 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 AVPP01185 164 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 HSPB1P04792 205 aaKnown RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 MDKP21741 143 aaPredicted RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 EFNA4P52798 201 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 MRPS11P82912 194 aaKnown RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 MMDQ15546 238 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 WDR25Q64LD2 544 aaPredicted RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 TMEM42Q69YG0 159 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 PRRT1Q99946 306 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 IGKV1-6A0A0C4DH72 117 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 SRRM5B3KS81 715 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 INAFM1C9JVW0 142 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 AGPAT2O15120 278 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 IGLV2-14P01704 120 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 IGKV1-16P04430 117 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 HOXA5P20719 270 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 CD34P28906 385 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 FAUP35544 74 aaKnown RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 GPX4P36969 197 aaPredicted RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 DVL1P1P54792 670 aaPredicted RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 ZNF818PQ6ZRF7 136 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 ERASQ7Z444 233 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 OR10G4Q8NGN3 311 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 THAP6Q8TBB0 222 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 ERGIC1Q969X5 290 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 ZNF714Q96N38 554 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 PYGO2Q9BRQ0 406 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 BIN3Q9NQY0 253 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 DMRT1Q9Y5R6 373 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 RFNGQ9Y644 331 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 RNASEK-C17orf49H0YIS7 233 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 GATCO43716 136 aaKnown RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 PPYP01298 95 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 RND2P52198 227 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 HERPUD1Q15011 391 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 COA6Q5JTJ3 125 aaKnown RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 GPR157Q5UAW9 335 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 NCR3LG1Q68D85 454 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 C1orf174Q8IYL3 243 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 TERB2Q8NHR7 220 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 RITA1Q96K30 269 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 FBXL15Q9H469 300 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 PLEKHF2Q9H8W4 249 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 RCL1Q9Y2P8 373 aaKnown RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 RAI1Q7Z5J4 1906 aaPredicted RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 hADV38S2A0JD32 116 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 CEBPZOSA8MTT3 80 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 C17orf98A8MV24 154 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 ZNF207O43670 478 aaKnown RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 CST4P01036 141 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 S100A8P05109 93 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 CHRM2P08172 466 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 MALP21145 153 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 IAH1Q2TAA2 248 aaPredicted RBP4.04□□□□□ -1.76
CAST-201ENST00000309190 SPANXN5Q5MJ07 72 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 CMTM1Q8IZ96 169 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 CCDC140Q96MF4 163 aa4.04□□□□□ -1.76
CAST-201ENST00000309190 TRAV3A0A0B4J244 114 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 ZNF561-AS1K7EIQ3 104 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 COX5BP10606 129 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 TMEM187Q14656 261 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 ELOBQ15370 118 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms