RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 MRPL20Q9BYC9 149 aaKnown RBP9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 NHLH2Q02577 135 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 MARVELD1Q9BSK0 173 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 TMPRSS5Q9H3S3 457 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 ELF5Q9UKW6 265 aaPredicted RBP9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 PDE6DO43924 150 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 PTBP3O95758 552 aaKnown RBP9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 CSRP3P50461 194 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 SMAGPQ0VAQ4 97 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 PRB1P04280 392 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 IL4P05112 153 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 ACAA1P09110 424 aaPredicted RBP9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 SLC35B3Q9H1N7 401 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 A0A0G2JK05 382 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 AMY1AP04745 511 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 CD33P20138 364 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 C1orf100Q5SVJ3 147 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 WDR82Q6UXN9 313 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 MAPK1IP1LQ8NDC0 245 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 PHLDA3Q9Y5J5 127 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 OR5AL1P0C617 328 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 HIST1H1AQ02539 215 aaPredicted RBP9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 ZNF525Q8N782 197 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 FOXA2Q9Y261 457 aaPredicted RBP9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 SUMO1P63165 101 aaKnown RBP9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 TEX261Q6UWH6 196 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 C1QL2Q7Z5L3 287 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 C2CD4CQ8TF44 421 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM189A5PLL7 270 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 C12orf54Q6X4T0 127 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 EIF4E3Q8N5X7 224 aaKnown RBP9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 GPR146Q96CH1 333 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 CFDP00746 253 aaPredicted RBP9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 SLC16A13Q7RTY0 426 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM133Q9H2Q1 129 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 PCNX2A6NKB5 2137 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 KIAA2026Q5HYC2 2103 aa9.01□□□□□ -0.97
SYNPO2-201ENST00000307142 PQLC2LA1A4F0 135 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 C12orf77C9JDV5 145 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 TNFRSF9Q07011 255 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 Q6ZN92 141 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 PIP4P1Q86T03 277 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 OR5AU1Q8NGC0 362 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 ZNF407Q9C0G0 2248 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM262E9PQX1 116 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 WNT2P09544 360 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 PGA5P0DJD9 388 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 MBNL2Q5VZF2 373 aaKnown RBP9□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM88Q6PEY1 159 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 LINC00114Q6XXX2 140 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 PLXNA2O75051 1894 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 SIAH2O43255 324 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 FAM53AQ6NSI3 398 aaPredicted RBP9□□□□□ -0.97
SYNPO2-201ENST00000307142 HSD17B13Q7Z5P4 300 aaPredicted RBP9□□□□□ -0.97
SYNPO2-201ENST00000307142 STHQ8IWL8 128 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 FGFBP3Q8TAT2 258 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 FABP4P15090 132 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM97Q5BJF2 176 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 VAX2Q9UIW0 290 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 SLC25A15Q9Y619 301 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 MBD3L4A6NDZ8 208 aaPredicted RBP9□□□□□ -0.97
SYNPO2-201ENST00000307142 MBD3L3A6NE82 208 aaPredicted RBP9□□□□□ -0.97
SYNPO2-201ENST00000307142 MBD3L5A6NJ08 208 aaPredicted RBP9□□□□□ -0.97
SYNPO2-201ENST00000307142 RPL7P18124 248 aaKnown RBP9□□□□□ -0.97
SYNPO2-201ENST00000307142 RNF212Q495C1 297 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM219Q86XT9 240 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 MBD3L2Q8NHZ7 208 aaPredicted RBP9□□□□□ -0.97
SYNPO2-201ENST00000307142 DNAJC4Q9NNZ3 241 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 CEP192Q8TEP8 1941 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 NBR2O15453 112 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 C1QL1O75973 258 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 CX3CL1P78423 397 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 OR2D3Q8NGH3 330 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 WBP1Q96G27 269 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 TCF19Q9Y242 345 aa9□□□□□ -0.97
SYNPO2-201ENST00000307142 LOC389332A0A1B0GUA5 103 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 KBTBD11O94819 623 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 OR10G8Q8NGN5 311 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 MSGN1A6NI15 193 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 LRRC75AQ8NAA5 344 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 NAT8Q9UHE5 227 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 TRAV20A0A0B4J274 112 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 PGPA6NDG6 321 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 A6NNC1 897 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 PRSS1P07477 247 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 AREGP15514 252 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 SLC25A16P16260 332 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 HIST1H3AP68431 136 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 KLRD1Q13241 179 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 MIC13Q5XKP0 118 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 NPIPB3Q92617 1050 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 RSG1Q9BU20 258 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 CTXND1A0A1B0GTU2 59 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 RAB9AP51151 201 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 MEOX2P50222 304 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 BRD3OSQ6XYD6 125 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 IGHV3OR16-8A0A075B7F1 116 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 A0A0B4J293 547 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 PSMB11A5LHX3 300 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 H3BTX0 84 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms