RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 Q96M66 194 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 GGACTQ9BVM4 153 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 A0A0B4J293 547 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 PGPEP1LA6NFU8 196 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 RAMP3O60896 148 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 PRSS2P07478 247 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 VAX1Q5SQQ9 334 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 OIT3Q8WWZ8 545 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 FBXL15Q9H469 300 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 IGHV3-11P01762 117 aa13.11□□□□□ -0.31
FNDC1-201ENST00000297267 ID1P41134 155 aa13.11□□□□□ -0.31
FNDC1-201ENST00000297267 FXYD7P58549 80 aa13.11□□□□□ -0.31
FNDC1-201ENST00000297267 MEF2BQ02080 365 aaPredicted RBP13.11□□□□□ -0.31
FNDC1-201ENST00000297267 ADAMTS7Q9UKP4 1686 aa13.11□□□□□ -0.31
FNDC1-201ENST00000297267 IL4P05112 153 aa13.11□□□□□ -0.31
FNDC1-201ENST00000297267 GPX1P07203 203 aa13.11□□□□□ -0.31
FNDC1-201ENST00000297267 RNASE4P34096 147 aaKnown RBP13.11□□□□□ -0.31
FNDC1-201ENST00000297267 NR2C2APQ86WQ0 139 aa13.11□□□□□ -0.31
FNDC1-201ENST00000297267 LINC00527Q9UJ94 153 aa13.11□□□□□ -0.31
FNDC1-201ENST00000297267 LTBP4Q8N2S1 1624 aa13.11□□□□□ -0.31
FNDC1-201ENST00000297267 EBLN2Q6P2I7 272 aa13.11□□□□□ -0.31
FNDC1-201ENST00000297267 M0R381 172 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 SS18L1O75177 396 aaPredicted RBP13.1□□□□□ -0.31
FNDC1-201ENST00000297267 CDKN1AP38936 164 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 HIST1H1AQ02539 215 aaPredicted RBP13.1□□□□□ -0.31
FNDC1-201ENST00000297267 ICAM4Q14773 271 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 A6NDN8 102 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 FAM106CPP0CH98 169 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 ZNF708P17019 499 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 FBLIM1Q8WUP2 373 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 TMEM54Q969K7 222 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 BRWD1Q9NSI6 2320 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 HIST1H2BAQ96A08 127 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 C11orf68Q9H3H3 251 aaKnown RBP13.1□□□□□ -0.31
FNDC1-201ENST00000297267 FSTP19883 344 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 AMMECR1LQ6DCA0 310 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 CLEC2AQ6UVW9 174 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 OR4D5Q8NGN0 318 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 DIRC2Q96SL1 478 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 RTBDNQ9BSG5 229 aaPredicted RBP13.1□□□□□ -0.31
FNDC1-201ENST00000297267 DDA1Q9BW61 102 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 LOC105371242A0A075B767 164 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 GAGE10A6NGK3 116 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 IGKV1D-33P01593 117 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 IGKV1-33P01594 117 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 NHLRC3Q5JS37 347 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 OR51G1Q8NGK1 321 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 LHFPL5Q8TAF8 219 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 TRAV8-6A0A0B4J262 113 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 MIR17HGQ75NE6 70 aa13.1□□□□□ -0.31
FNDC1-201ENST00000297267 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
FNDC1-201ENST00000297267 POC1AQ8NBT0 407 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 RNASE7Q9H1E1 156 aaKnown RBP13.09□□□□□ -0.31
FNDC1-201ENST00000297267 DEPPQ9NTK1 212 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 SMIM10L1P0DMW3 83 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 OR13A1Q8NGR1 328 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 SMIM10Q96HG1 83 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 MGST3O14880 152 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 LEPROTL1O95214 131 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 NABP2Q9BQ15 211 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 PARD6GQ9BYG4 376 aaPredicted RBP13.09□□□□□ -0.31
FNDC1-201ENST00000297267 DNAJC4Q9NNZ3 241 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 IGHV3-64A0A075B6Q5 118 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 EVI2AP22794 236 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 PCSK4Q6UW60 755 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 OR5P3Q8WZ94 311 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 IGHV1-69-2A0A0G2JMI3 117 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 C1orf53Q5VUE5 145 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 GPR82Q96P67 336 aa13.09□□□□□ -0.31
FNDC1-201ENST00000297267 PRR32B1ATL7 298 aa13.08□□□□□ -0.31
FNDC1-201ENST00000297267 IL6RP08887 468 aaPredicted RBP13.08□□□□□ -0.31
FNDC1-201ENST00000297267 NPC2P61916 151 aa13.08□□□□□ -0.31
FNDC1-201ENST00000297267 ATP5G2Q06055 141 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 BSPH1Q075Z2 132 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 CLEC19AQ6UXS0 136 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 COX6B1P14854 86 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 CENPVQ7Z7K6 275 aaPredicted RBP13.08□□□□□ -0.32
FNDC1-201ENST00000297267 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
FNDC1-201ENST00000297267 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.32
FNDC1-201ENST00000297267 PINLYPA6NC86 204 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 PRR33A8MZF0 331 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 HTN3P15516 51 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 PLP1P60201 277 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 SCARF2Q96GP6 870 aaPredicted RBP13.08□□□□□ -0.32
FNDC1-201ENST00000297267 LYZL4Q96KX0 146 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 ZNF430Q9H8G1 570 aaPredicted RBP13.08□□□□□ -0.32
FNDC1-201ENST00000297267 C1RLQ9NZP8 487 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 ZNF506Q5JVG8 444 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 FGFBP3Q8TAT2 258 aa13.08□□□□□ -0.32
FNDC1-201ENST00000297267 SCGB1A1P11684 91 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 OR10S1Q8NGN2 331 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 KLHDC3Q9BQ90 382 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 TRAV14DV4A0A0A6YYC5 116 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 CCL3L1P16619 93 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 KLRB1Q12918 225 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 NFAM1Q8NET5 270 aaPredicted RBP13.07□□□□□ -0.32
FNDC1-201ENST00000297267 SLC25A28Q96A46 364 aa13.07□□□□□ -0.32
FNDC1-201ENST00000297267 ATP5J2P56134 94 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms