RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CCL13Q99616 98 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 WIPI2Q9Y4P8 454 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 SCO2A0A1W2PP80 73 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 AMTP48728 403 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 STUMQ69YW2 141 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 C1QL4Q86Z23 238 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 ZCCHC24Q8N2G6 241 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 TMEM45BQ96B21 275 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 CEP295Q9C0D2 2601 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 CACNA1AO00555 2505 aa13.57□□□□□ -0.24
PDZRN3-201ENST00000263666 TRGV10A0A0A0MS01 117 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 H3BTX0 84 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 RRHO14718 337 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 IGHV2-5P01817 119 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 NPY1RP25929 384 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 PAX5Q02548 391 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 CCL17Q92583 94 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 SPRR3Q9UBC9 169 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 GNG4P50150 75 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 RNFT1Q5M7Z0 435 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 CYP2G1PQ6ZSU1 146 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 OR8I2Q8N0Y5 310 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 LINC00470Q9BZP3 86 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 DECR2Q9NUI1 292 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 RNF115Q9Y4L5 304 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 IGHV3-72A0A0B4J1Y9 119 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 TCAPO15273 167 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 HAPLN4Q86UW8 402 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 ITLN1Q8WWA0 313 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 SPSB4Q96A44 273 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 KLF2Q9Y5W3 355 aaPredicted RBP13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 ZNF600Q6ZNG1 722 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 ZNF497Q6ZNH5 498 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 LINC00596Q86U02 117 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 DOLPP1Q86YN1 238 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 TGIF2LXQ8IUE1 241 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 OR1L6Q8NGR2 347 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 OR10X1Q8NGY0 326 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 GTF3AQ92664 365 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 HSPB9Q9BQS6 159 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 TMEM140Q9NV12 185 aa13.56□□□□□ -0.24
PDZRN3-201ENST00000263666 CECR9P0C854 216 aa13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 HIST1H1BP16401 226 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 CD81P60033 236 aa13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 PSMG3Q9BT73 122 aaPredicted RBP13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 SRD5A3Q9H8P0 318 aa13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 NCOR2Q9Y618 2525 aa13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 LHFPL4Q7Z7J7 247 aa13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 OR8G5Q8NG78 346 aa13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 ZNF331Q9NQX6 463 aaPredicted RBP13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 TRAV3A0A0B4J244 114 aa13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 RHOBP62745 196 aa13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 MZT1Q08AG7 82 aa13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 GMPPAQ96IJ6 420 aaPredicted RBP13.55□□□□□ -0.24
PDZRN3-201ENST00000263666 A0A087WWC5 75 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 LINC00473A8K010 186 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 AMBPP02760 352 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 OR9G9P0C7N8 305 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 COX5BP10606 129 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 GPX4P36969 197 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 ATOH7Q8N100 152 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 MS4A5Q9H3V2 200 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 ORM2P19652 201 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 WDR86Q86TI4 376 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 TMEM183AQ8IXX5 376 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 P2RX4Q99571 388 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 SSBP3Q9BWW4 388 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 GATCO43716 136 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 CRYBB3P26998 211 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 OPRK1P41145 380 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 FOXF2Q12947 444 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 ASPHD1Q5U4P2 390 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 SLC35E1Q96K37 410 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 VAMP8Q9BV40 100 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 SLC35D1Q9NTN3 355 aa13.54□□□□□ -0.24
PDZRN3-201ENST00000263666 ZNF253O75346 499 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 ZNF25P17030 456 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 KLF3P57682 345 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 RPL31P62899 125 aaKnown RBP13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 ANAPC16Q96DE5 110 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 TNFAIP6P98066 277 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 PRSS8Q16651 343 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 BORCS7Q96B45 105 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 TCF19Q9Y242 345 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 Q6P435 159 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 TMEM256Q8N2U0 113 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 A0A1W2PRD5 423 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 A0A1W2PRF3 423 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 A0A1W2PRM7 423 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 OR10J1P30954 320 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 ACP7Q6ZNF0 438 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 PQLC2Q6ZP29 291 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 OR4S2Q8NH73 311 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 SH2D2AQ9NP31 389 aa13.53□□□□□ -0.24
PDZRN3-201ENST00000263666 FAM90A27PA6NNH2 459 aa13.52□□□□□ -0.24
PDZRN3-201ENST00000263666 J3QR06 171 aa13.52□□□□□ -0.24
PDZRN3-201ENST00000263666 CGAP01215 116 aa13.52□□□□□ -0.24
PDZRN3-201ENST00000263666 TPPP2P59282 170 aa13.52□□□□□ -0.24
PDZRN3-201ENST00000263666 INO80CQ6PI98 192 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms